Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02807 ATGGTGAAGAAGTGGAGTTGGGGAGAGCCGTTGCTGCTAGTCAGTATCTGCATTTTGGGATGGAGGATTAGTTTTATCAATGGAGCTACGGATCCAGGAGATGTATCGGCTCTAAATGCCATGTATACTAGTTTAAACTCTCCTCCAATTCTAACACAATGGAGTTCGAGTGGTGGAGATCCATGTGGACAAATTTGGAAAGGCATTACTTGCTTGGGCTTAAGGGTCACAGAAATTTCATTGTCTGGTTTAGGACTTTCTGGAACACTGGGATACCAGCTCTCAAGTTTGACATCCCTAACTAATCTAGATGTGAGTAACAACAATCTTGGACCTGACATACCTTATCAGCTCCCTCAAAACTTGCAAAAACTAAACCTTGGATGGAATAACTTCAGTGGAAGCATCCCCTATTCTATTTCTCAAATGAGTTTGCTTATTTCCTTGAACATGAGCCACAATCAGCTTCAGAATCAAGTGAATGATATGTTCTGGAAGCTTTCTTCCCTGGCCATGTTGGACGTCTCTTTCAATTTTCTGTCAGGTGCCCTCCCCCAGAGTTTTAGCAACCTTACCAGTCTTAACGCTATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCGCTACAAAATTTGAATGTCGAGAACAACCATTTTACTGGTTGGGTTCCTGAACGATTGAAGAATATAAATATTCAGGAGGGAGGAAATTCTTGGAGCTTTGGGCTTGCGCCCCCACCTCCGCCTGGGACTCCTCCAGCCAACCAAAATTACAGATATCACAAGGCAGGGAACAGTTACAGCCCACTGAGTAGTGATGCTGCTGGTGGGGGTAGCAATAGATCAGGAATCGGTGGTGGTGCCATTGCTGGAATTCTTATATCTGTGCTAGTGGTAGGAGCAATACTAGCATATCTTCTAGCAAAGAGGAGATCCAAGAGGCCATCCACAGACATAGAAAAGCAAAAGCATGGGAACTTGCCTATTGTATCTCCTGCTTCAAATGAAGTGCAAGACGCGTTGGCAGAGATGAAGCTTGTTCATACTTCATCCTCATTTGATGCAAAAGAATTGGACTCTCCTGCTTCAATCAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTTGATGACAATGATACATCAAAGGTACCTGTGGTGAAGAAGACCAATGTCACTGCTCCCATAAGTGTGAAATCATATTCAATAGCAGATCTGCAAATGGCTACAGGTAGTTTCAATGTAGAAAACCTTCTTGGTGAGGGACCACTTGGACGTGTTTATCGGGCTCAGTTCAACGATGGGAAGGTTCTTGCAGTGAAGAAAATAGATTCAGCTGCCTTCCATAGAGAATTGTTGGAAGATTTCACAGAGATCGTTGCTAATATATCTCAGCTGCATCATCCTAATGTAACCGAGCTAACAGGCTATTGCTCAGAGCATGGCCTGCATTTGCTAATATATGAGTTCCATAAGAATGGCTCACTACATGACTTCTTGCACATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATTGCTTTAGGGACGGCCCGTGCTTTAGAGTACCTACATGAAGTTTGTGCCCCCTCAGTTGTTCACAGAAATATCAAGTCAGCCAATATCTTACTAGATGCTGAAATGAATCCTCATCTCTCCGATTGTGGTCTGGCTAGCTTTATAACCAATCTAGATCACGCATTGGATCAACAGGCAGGATCTGGGTACAGTGCTCCTGAGGTTACCATGTCTGGTCAATATACATTAAAAAGCGACGTATATAGTTTTGGAGTGGTGATGTTAGAACTTCTAAGCGGACGTAAGCCATTTGATAGTTCAAGGCCAAGGGCTGAGCAATCCTTGGTTCGATGGGCTACGCCTCAGCTCCATGATATCGATGCCTTGACGAAAATGGTTGATCCTGCACTTAAAGGGCTCTACCCAGTTAAGTCTCTCTCGAGATTTGCAGACGTTGTAGCTCTTTGCGTCCAGCCTGAGCCTGAATTCAGACCACCCATGTCAGAGGTGGTGGAAGCGTTGGTTCGGCTTGTGCAGAGATCCAACATGAGCAGAAGAACGTTTGGAAGTGATCATGGATCATCTTTTAGAACTGATGATCTTGAAGCACGTGAAACATCTTAA 2181 43.74 MVKKWSWGEPLLLVSICILGWRISFINGATDPGDVSALNAMYTSLNSPPILTQWSSSGGDPCGQIWKGITCLGLRVTEISLSGLGLSGTLGYQLSSLTSLTNLDVSNNNLGPDIPYQLPQNLQKLNLGWNNFSGSIPYSISQMSLLISLNMSHNQLQNQVNDMFWKLSSLAMLDVSFNFLSGALPQSFSNLTSLNAMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPPANQNYRYHKAGNSYSPLSSDAAGGGSNRSGIGGGAIAGILISVLVVGAILAYLLAKRRSKRPSTDIEKQKHGNLPIVSPASNEVQDALAEMKLVHTSSSFDAKELDSPASINLKPPPIDRHKSFDDNDTSKVPVVKKTNVTAPISVKSYSIADLQMATGSFNVENLLGEGPLGRVYRAQFNDGKVLAVKKIDSAAFHRELLEDFTEIVANISQLHHPNVTELTGYCSEHGLHLLIYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSANILLDAEMNPHLSDCGLASFITNLDHALDQQAGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDDLEARETS* 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26882602 26891283 - CsaV3_3G031130.1 Csa03g02807 523712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02807 726 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Csa03g02807 726 Pfam Protein tyrosine and serine/threonine kinase 423 693 IPR001245 GO:0004672|GO:0006468
Csa03g02807 726 SUPERFAMILY L domain-like 30 236 - -
Csa03g02807 726 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 20 720 - -
Csa03g02807 726 MobiDBLite consensus disorder prediction 370 390 - -
Csa03g02807 726 Gene3D Phosphorylase Kinase; domain 1 382 498 - -
Csa03g02807 726 PANTHER OS01G0253100 PROTEIN 20 720 IPR045271 GO:0004714|GO:0006468
Csa03g02807 726 SUPERFAMILY Protein kinase-like (PK-like) 402 693 IPR011009 -
Csa03g02807 726 SMART LRR_typ_2 97 121 IPR003591 -
Csa03g02807 726 SMART LRR_typ_2 143 166 IPR003591 -
Csa03g02807 726 SMART LRR_typ_2 167 190 IPR003591 -
Csa03g02807 726 MobiDBLite consensus disorder prediction 705 726 - -
Csa03g02807 726 ProSiteProfiles Protein kinase domain profile. 421 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g02807 726 Gene3D Ribonuclease Inhibitor 31 250 IPR032675 -
Csa03g02807 726 Pfam Leucine rich repeat 121 178 IPR001611 GO:0005515
Csa03g02807 726 Gene3D Transferase(Phosphotransferase) domain 1 500 717 - -
Csa03g02807 726 MobiDBLite consensus disorder prediction 245 270 - -
Csa03g02807 726 MobiDBLite consensus disorder prediction 711 726 - -
Csa03g02807 726 CDD STKc_IRAK 427 696 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g02807 Csa07g02300 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02807 Csa-Chr3:26882602 Csa06g03601 Csa-Chr6:29085557 7.76E-168 dispersed
Csa01g03495 Csa-Chr1:31905787 Csa03g02807 Csa-Chr3:26882602 0 transposed
Csa06g00324 Csa-Chr6:2405503 Csa03g02807 Csa-Chr3:26882602 0 transposed
Csa06g03658 Csa-Chr6:29410431 Csa03g02807 Csa-Chr3:26882602 1.59E-44 transposed
Csa03g02807 Csa-Chr3:26882602 Csa07g02300 Csa-Chr7:21374921 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78014 PF07714 PK_Tyr_Ser-Thr 5.50E-42 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02807 - - csv:101208239 1400.96