Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02870 ATGGAATCTCTTCTTCTTACCCGACATTCAAATGTTAGAGATATTCATAGCAATTTTTATTTTTACAGCAACAAGATCATTGAGGCAAAAAAGAAACAGGGGCTACCTGTGTGGCCAGTTGTCGGAATGTTACCGTCTTTAGTCACTGGACTCCGAAGCAACTTGTATGAATGGATCACCGAAGTGCTATGCCGTCAAAATGGAACTTTCAGATTCAAAGGGCCATGGTTCAGTAGCTTGAATTGGGTTGTAACTTCAGATCCTCGTAACATTGAGCACATTCTGAAAACAGAGTTTCTCAAGTACCCAAAAGGCTCCTTCTTCCGTGAAACAGTCCATGACCTTCTCGGCGACGGAATCTTCAACGCGGACGGCGAGATTTGGCACAAGCAGAGGAAGACAACCAGCATCGAATTCCATTCAGCAAAGTTCCGACAACTCACTGTGGAGTCCCTCCACGAGTTAGTCCACTCTCGGCTCCTCCCTATTTTACACAGACATTTCGTCGAACACTTGGTGCCCATTGATCTCCAAGACATTCTTCTACGCCTAACATTCGACAATGTCTGTATGATCGCATTCGGCGTTGAACCCGGCTGTTTGAACCCTAATTTACCAGTGATTCCCTTCGCCCACGCCTTCGAGGTGGCAACGGAAGCGACCGTTCTTCGATTCGTAACACCGCAATTCTTATGGAAAACAATGAGGCATTTCAATTTAGGAACAGAAAAGAGTCTCAAATTCGCCCTAAAAGAGGTCAATGAATTCGCAATGAACGTAATTGAAAAGAGAAGAAGAGAGAAGGTCAATGAAACCGAGAGATCGGACCTGTTATCAGTGTTTACGGGACTGAAGGACGAGAACGGGGAGCCGTATTCGGACAAGTTCTTGAAAGATATATGCGTGAATTTTATACTTGCCGGAAGAGATACGTCGTCAGTAGCGTCGAGTTGGTTCTTTTGGCTGATTGATCGAAATCCAGAAGTGGAAGAGAGAATTGTGGAGGAGATCTGCCGGATATTGAAGAAGAGAGGAGAGGCGGCGGGGGAATCGTCGGGCGGCAATGTGAAGTTTGAAGTAGAAGAGATAAAGAAGATGGAATATTTGCAAGCCGCTCTTTCTGAAGCTTTGAGATTGTTCCCTTCTGTGCCTGTTGATCACAAGGAGGTCATTCAGGATGATGTATTACCAAATGGAACAGAGCTAAAGAAGGGAACAAAACTGGTCTATGCAATATATGCAATGGGTAGAACGGAGGCAATATGGGGAAAAGATTGTTATGAATTCAAGCCAGAGAGATGGTTAAGAGATGGTTAA 1317 44.65 MESLLLTRHSNVRDIHSNFYFYSNKIIEAKKKQGLPVWPVVGMLPSLVTGLRSNLYEWITEVLCRQNGTFRFKGPWFSSLNWVVTSDPRNIEHILKTEFLKYPKGSFFRETVHDLLGDGIFNADGEIWHKQRKTTSIEFHSAKFRQLTVESLHELVHSRLLPILHRHFVEHLVPIDLQDILLRLTFDNVCMIAFGVEPGCLNPNLPVIPFAHAFEVATEATVLRFVTPQFLWKTMRHFNLGTEKSLKFALKEVNEFAMNVIEKRRREKVNETERSDLLSVFTGLKDENGEPYSDKFLKDICVNFILAGRDTSSVASSWFFWLIDRNPEVEERIVEEICRILKKRGEAAGESSGGNVKFEVEEIKKMEYLQAALSEALRLFPSVPVDHKEVIQDDVLPNGTELKKGTKLVYAIYAMGRTEAIWGKDCYEFKPERWLRDG* 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27472038 27474007 - CsaV3_3G031760.1 Csa03g02870 523775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02870 438 PANTHER CYTOCHROME P450 86B1-LIKE 26 437 - -
Csa03g02870 438 SUPERFAMILY Cytochrome P450 34 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02870 438 Gene3D Cytochrome P450 18 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02870 438 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02870 438 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02870 438 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02870 438 Pfam Cytochrome P450 34 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02870 438 PANTHER CYTOCHROME P450 26 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02870 Csa-Chr3:27472038 Csa06g00061 Csa-Chr6:403217 2.67E-118 dispersed
Csa03g02870 Csa-Chr3:27472038 Csa07g01975 Csa-Chr7:19392733 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02870 K15402 - csv:101222831 888.641