Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02963 ATGGAGAAGAAGACTTATCCCATAGGTGAAGATTCTTATATTCTATATGAAGAGGTTGGGCAGGGTGTGAGCGCTTCAGTTCACCGTGCTCTTTGTAAATCTCTCAATGAAATCGTCGCCATCAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCATCCGAATGTCCTTAAATCACACTGCTCCTTTGTCAATGGCCATGATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAGGTCGTGATAGCAACAGTATTGCGAGAAGTATTGAAGGGAGTTGAATATCTTCATAATCATGGACATATACATCGGGATATAAAAGCAGGGAATGTTCTCATTGATTCACGTGGTGGAATCAAGCTAGGAGACTTTGGTGTTTCTGCTTGCCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCCGAGGTTATGGAGCAATTAAATGGTTATGACTTTAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCCCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAATGCACCTCCAGGGCTTGATTATGAGAGAGATAAAAAATTTTCAAAGTCTTTCAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCTTCTGCAAGTAAGCTGCTAAAGCATTCTTTTTTTAGGCAAGCCCGGTCAAATGATTACATTGCACGCGCCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTTAAGAGAAAGGAAGAAGATATGCTAGCACAAAAGAAAATTTCAGATGGAAAAAAGGAAGAATTATCACAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCCCAGGCATCTCTGATTCAGGAATTTGAAGAGTCTATTAGTGAAATGAGTGAAGTAGGGAGCTCAAATTCATTGAATGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATGTTGAAGAGAATGCCATGCTCCGGAGACAACCCTCCATGAAAGCAAATGATACAGTAAATGGTAAAAAATCTATCAATGAATCAACAAGTATTGGTTCTTGCTCCCAACATCAGTCTTCACCCCGCCATGATAATCAAACTGAGAATGGCTCCAATGAAGAGGTTAATTTGGAGAGCAGCAGAAGAATTTTGGGGAATACTCCTAATACTATCCAACATAAAAGAAGTATTTCTTCTAATACCTCTATTCAACAAGAAGTCAGTTTGCCTCTGAACAGAAGAGAGAGTTACGAGATAGAAAAGAATGGTGCCAATGGCAGTCCTGCAATGGGAGTGACTTCCCAGGCAGTAGATGATGCACTTTCTGATTCTCAGTCTAAAGATCCCAAATCATCATTAAGTCCAGCAATAACTGAAGAGGAACAGGATGAGAAAGCGAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACGTCAGAGAGTGTCGATCTAGAAAAGGCAGCGGCATCCCCTATTCTGCAAAAAAGTCACAGTATGCAGGTGATTACCTCAAATTGTGCTACTCCTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACTGACACCTCTACCTTCATCTGATGCTATACCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAATCTCAACTGGAGAATTTTCAGCAGATGGCGTAGTTGATGTCTCAGCGGCACATATAACAGCAACGGAGAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGAGTTACAGTGGAGGATATTACGGGCGAGAGATGAAATCCAAAGATTAAAATTAAACAATGCAGGTTAA 2094 40.93 MEKKTYPIGEDSYILYEEVGQGVSASVHRALCKSLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHDLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKAGNVLIDSRGGIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFRQARSNDYIARALLEGLPVLGDRIKALKRKEEDMLAQKKISDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEMSEVGSSNSLNALDVQEKKLQGQNSSEISDVEENAMLRRQPSMKANDTVNGKKSINESTSIGSCSQHQSSPRHDNQTENGSNEEVNLESSRRILGNTPNTIQHKRSISSNTSIQQEVSLPLNRRESYEIEKNGANGSPAMGVTSQAVDDALSDSQSKDPKSSLSPAITEEEQDEKAKAPVIQQKGRFKVTSESVDLEKAAASPILQKSHSMQVITSNCATPLPSNLPTPLLTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMRQISTGEFSADGVVDVSAAHITATEKSLLEAAHEREKDLLNEVTELQWRILRARDEIQRLKLNNAG* 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28193381 28201823 + CsaV3_3G032690.1 Csa03g02963 523868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02963 697 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g02963 697 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Csa03g02963 697 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Csa03g02963 697 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g02963 697 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Csa03g02963 697 Coils Coil 660 694 - -
Csa03g02963 697 MobiDBLite consensus disorder prediction 398 478 - -
Csa03g02963 697 MobiDBLite consensus disorder prediction 504 536 - -
Csa03g02963 697 CDD STKc_OSR1_SPAK 11 274 - -
Csa03g02963 697 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 696 - -
Csa03g02963 697 MobiDBLite consensus disorder prediction 504 523 - -
Csa03g02963 697 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 696 - -
Csa03g02963 697 Gene3D Transferase(Phosphotransferase) domain 1 94 327 - -
Csa03g02963 697 MobiDBLite consensus disorder prediction 375 481 - -
Csa03g02963 697 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02963 Csa-Chr3:28193381 Csa05g01916 Csa-Chr5:22320443 0 dispersed
Csa03g02963 Csa-Chr3:28193381 Csa02g00036 Csa-Chr2:320884 8.65E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78023 PF00069 Pkinase 1.10E-58 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02963 K08835 - csv:101211076 1337.01