Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g03048 | ATGGACATGGATACAGACGAAAATTCGAATGCTAAAGGAAAGGAAGGGCAAGGAAAGCTCATAATGGTAATATTAGTGGGTGCACCTGGAAGTGGCAAGTCCACCTTTTGCGAACTTGTTATGGGTTCCTCTTCTCGCCCTTGGGTTCGAATCTGTCAGGATACCATTGGAAATGGCAAGTCTGGAACCAGAGCACAGTGCTTGAAGACTGCAACGAGTGCACTGAATGATGGAAAAAGTGTATTCGTGGACAGGTGCAATCTTGAAATAGAGCAGCGTGCAGATTTTGTGAAGCTCGGGGGCCCTCAAGTGGATGTACATGCTGTTGTATTAGATCTTCCTGCTCAGCTCTGTATCTCTCGTTCTGTTAAGCGGACTGGTCATGAAGGGAACTTATCAGGTGGAAAAGCTGCTGCTGTTGTGAATAAAATGCTGCAAAAGAAAGAATTGCCCAAACTTAATGAAGGGTTCACTCGCATAACCTTTTGCCATAATGAGTCCGACGTTCTATCCGCTATAGATATGTACAAATCGCTTGATTTACATACTATGCTTCCACATGGATGTTTTGGACAGAAGAACCCAGACAAGAAAGTACAACTTGGCATAACGAAGTTCTTGAAGAAAGCAGAAAAACCTTCAAAAACGTGTTCTAGTGCCAATACCGACAAGAATTCTCCAACTCCTCAACCTACCCAGGAAAAGAGGGAGTCTTGTGGTAAAAAGGAAGAGTCTTCCTGCACAATGTCGAGAAATGTAGCTATGGAGTCAGAGAAAGGTGAAAGTCCAGGCATTAGATCCTTAAAAGACAAGATTTCTCAAAGTGATCCACCAACTCTTGCATTCCCATCTATTTCGACTTCAGATTTCAAGTTTAGCCATGAGAAGGCTGCTGAAATTATTGTTGAGAAGGTTGAAGAATTCATGGATAAGCTTGGAAATGCCAGACTTGTACTGGTAGACTTGAGTCATGGATCAAAGATATTGTCTATGGTTAAAGCTAAAGCAACCGAGAAAAATATTAGTTCCACCAAGTTTTTTACATTCGTAGGTGATATAACTAAACTCAATTCCGAAGGTGGATTGCGCTGCAATGTTATAGCCAATGCTGCAAACTGGCGACTGAAACCAGGAGGTGGTGGTGTGAATGCTGCAATTTTTAGTGCTGCAGGTTCCGGTCTGGAAGTGGCAACTAAACAACAAGCAAACTCCCTTCAACCTGGAAATGCCGTGGCTGTTCAATTGCCTTCAACTTCTCCTTTATTAAATAGGGAAGGAGTAACCCATGTCATACATGTTCTTGGGCCCAACATGAATCCACAAAGGCCAAATTATCTCAACAATGACTATGATGAAGGTTGCAAGCTTCTTGGCAATGCTTACTCTTCCCTATTTCAGGCCTTTATTTCAATCGTACAAGACAAATACAAGTCGGTTAAGGGAATTCATGAATGTCTCGGCTCAACACCTCCAGAACTACAAAAGCACTCTGAGGACGGTCATCACAAGTTTAAGAGAGAGAATTTGCAAAATCTTGAAAGAAGCAAAAAATGGAAAGGATCTCAGAACTCAACCGAAGGATTAAACCAAAACAACAATACTGTTCCCAAAAAGAGTAAGCACTGGGGTTCGTGGGCACAAGCACTTTATGACACTGCAATGCATCCCGAGCGACATACCAATTCTGTACTAGAGACATCAGATGATGTTGTAGTACTGTATGATATTTATCCGAAGGCACGCAAGCATCTTTTAGTAGTGGCTCGGCATGAAGGCCTCGATCAACTAGCCGACGTATGTACAGAACACCTTCCATTATTGAGGACAATGCACGCTATGGGTTTGAAGTGGATCAATAAGTTCTTTCGTGAAGATGGCCCATTGGTCTTTCGCCTCGGATACCACTCGGCTCCATCAATGAGGCAGCTGCACCTCCATGTTATAAGCCAGGATTTCGATTCCAGTCATCTGAAAAACAAGAAGCACTGGAATTCTTTCAACACCGATTTCTTCAGAGACTCAGTCATCGTTATAAACGAAGTCAGTAGCCATGGAAAGGCGAACATCATGGACGATGAGAGCTTGATGTCTATGGAGTTACGTTGCAACAGATGCAGAAGTGCTCATCCCAACTTACCCAAGTTGAAAGCGCATATTTCCAAATGCCAAGCGCCTTTCCCTTCCACACTGCTCGAGGGCGGTCGTTTAGTCGTTGAGCCAAGTAATGCTCCTCTCTCTTAG | 2241 | 43.33 | MDMDTDENSNAKGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKSGTRAQCLKTATSALNDGKSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNESDVLSAIDMYKSLDLHTMLPHGCFGQKNPDKKVQLGITKFLKKAEKPSKTCSSANTDKNSPTPQPTQEKRESCGKKEESSCTMSRNVAMESEKGESPGIRSLKDKISQSDPPTLAFPSISTSDFKFSHEKAAEIIVEKVEEFMDKLGNARLVLVDLSHGSKILSMVKAKATEKNISSTKFFTFVGDITKLNSEGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGSGLEVATKQQANSLQPGNAVAVQLPSTSPLLNREGVTHVIHVLGPNMNPQRPNYLNNDYDEGCKLLGNAYSSLFQAFISIVQDKYKSVKGIHECLGSTPPELQKHSEDGHHKFKRENLQNLERSKKWKGSQNSTEGLNQNNNTVPKKSKHWGSWAQALYDTAMHPERHTNSVLETSDDVVVLYDIYPKARKHLLVVARHEGLDQLADVCTEHLPLLRTMHAMGLKWINKFFREDGPLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNKKHWNSFNTDFFRDSVIVINEVSSHGKANIMDDESLMSMELRCNRCRSAHPNLPKLKAHISKCQAPFPSTLLEGGRLVVEPSNAPLS* | 747 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 28781132 | 28785115 | + | CsaV3_3G033540.1 | Csa03g03048 | 523953 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g03048 | 746 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 22 | 165 | IPR027417 | - | |
Csa03g03048 | 746 | SUPERFAMILY | HIT-like | 531 | 706 | IPR036265 | - | |
Csa03g03048 | 746 | MobiDBLite | consensus disorder prediction | 515 | 539 | - | - | |
Csa03g03048 | 746 | SMART | YBR022w_8 | 345 | 519 | IPR002589 | - | |
Csa03g03048 | 746 | ProSitePatterns | HIT domain signature. | 631 | 649 | IPR019808 | - | |
Csa03g03048 | 746 | SUPERFAMILY | Macro domain-like | 327 | 467 | IPR043472 | - | |
Csa03g03048 | 746 | Pfam | AAA domain | 22 | 144 | - | - | |
Csa03g03048 | 746 | MobiDBLite | consensus disorder prediction | 513 | 539 | - | - | |
Csa03g03048 | 746 | MobiDBLite | consensus disorder prediction | 214 | 279 | - | - | |
Csa03g03048 | 746 | Pfam | Macro domain | 368 | 451 | IPR002589 | - | |
Csa03g03048 | 746 | Gene3D | - | 544 | 725 | IPR036265 | - | |
Csa03g03048 | 746 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 325 | 480 | IPR043472 | - | |
Csa03g03048 | 746 | Pfam | Scavenger mRNA decapping enzyme C-term binding | 555 | 662 | - | - | |
Csa03g03048 | 746 | MobiDBLite | consensus disorder prediction | 214 | 234 | - | - | |
Csa03g03048 | 746 | Gene3D | - | 3 | 177 | IPR027417 | - | |
Csa03g03048 | 746 | Pfam | C2HE / C2H2 / C2HC zinc-binding finger | 667 | 721 | IPR032566 | - | |
Csa03g03048 | 746 | PANTHER | APRATAXIN-RELATED | 20 | 742 | - | - | |
Csa03g03048 | 746 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 181 | 324 | IPR043472 | - | |
Csa03g03048 | 746 | ProSiteProfiles | HIT domain profile. | 549 | 657 | IPR011146 | GO:0003824 | |
Csa03g03048 | 746 | PANTHER | APRATAXIN | 20 | 742 | IPR026963 | GO:0003677|GO:0006281|GO:0033699 | |
Csa03g03048 | 746 | ProSiteProfiles | Macro domain profile. | 333 | 585 | IPR002589 | - | |
Csa03g03048 | 746 | SUPERFAMILY | Macro domain-like | 265 | 315 | IPR043472 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g03048 | K10863 | - | csv:101216867 | 1510.74 |