Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03164 ATGGGTTCCTGCAAGTTTCTCATCGCTATGGCTTCTAATTTTGATCGCCCCTTACGAAGAAATGGTGCTTATGATGCTCGGTTACACGGAAGAGAGATGAACAAAAATCCCATGTTTTTCAATCTCTCAATTGTGGTGTCTCTGCTTCTAGTCTCAGTAGTCTCATCAGCTGCTTCTAAAGGTACTGATTTCATCTTCCATGGCTTCCAATCTGCAAATCTATCACTCGATGCTATGGCTGTTGTTACCTCAAATGGCCTCTTGAAACTGACCAACGAGACCAGGCAAAAAATTGGCCATGGGTTTTATCCTAATCCTGTAAATTTTGTCGATTTCTCTCATGGCGTTTCATCTTTCTCAACTACTTTTGTCTTTGCCATTATTTCTGAATACCCAAATCTAAGTGGCCATGGAATTGCCTTTGTGGTGGCTCCGACGAAAACTTTCCCCGGAGCTGAGCCAAGTCAGCATCTTGGCATTTTTAATGACAACAACAACGGTAACACAAACAACCATATTTTCGCTGTAGAACTCGATACAATTCAGAATCTAGAGTTGAAAGATATAGATGCGAATCATGTTGGTATAGATATAAATGGGTTGATTTCTAAGAAAGCTGAAACTGCTGGGTTTTATCCTTCCAACAATGGGGAATTCAGAAATTTGAGTCTTATAAGTGGCCAACCAATGCAAGTTTGGATCGAATATGATGGTATCAACAAAGAGATCAATGTCACTTTGGCACCAATTAACATACCCAAACCCAAAATTCCACTTTTATCTTACGTCTGGGACCTTTCGTCCGTCATAAAAAACTCTTCCATGTTCGTCGGGTTTTCATCCTCCACTGGCTCTGTTTCAACTTCTCATTATATTTTAGGTTGGAGTTTCAGATTAAACGGCCAAGCTCAAAGTCTTGACATTTCTCGTCTTCCAAAGCTGCCTCAGAAAAAACATAGATCCAAAGTTTTAACAATTGGGTTGCCTTTAATTTCTGGAGGGATTGCTTTATTGGTTATTTTATCCATTGTCCATGTTATCAGAAGGAAGAGGAAGTTCGCCGAGCTGCTCGAAGATTGGGAGCTTGATTATGGGCCTCATAGGTTCAAATACAAAGACTTATACACAGCTACAAATGGATTTAAAGAAAAAGAAATTCTGGGTTCTGGAGGATTTGGACGAGTCTACAAAGGTGCATTACCAAAATCAAAACTTGAAATAGCTGTAAAGAGGGTTTCTCATGAATCAAGACAAGGAATGAAAGAATTTGTAGCTGAGATAGTTAGTCTTGGGAGGCTTCGTCATAGAAACCTTGTACAACTTTTAGGCTACTGTAGACGAAAAGGAGAGCTGCTTTTAGTATATGATTATATGCAAAATGGAAGCTTGGACAAGTACCTGTTTAACGAAACAAATCCAAGTTTGAACTGGAGCCAGAGATTTCGAATCATAAAAGGAGTGGCTTCAGGGCTGCTTTACCTGCATGAAGAATGGGAGCAAACTGTTATTCACAGAGATGTAAAAGCCAGTAATGTCTTACTAGACAATGAGTTAAATGGAAGATTAGGAGATTTCGGTTTGGCAAGACTGTATGATCACGGAACAGACCCTCAAACAACTCATATTGTAGGAACACTCGGATATTTGGCTCCAGAGCACACGAGATCCGGCAGGCCGACGACTCAAATGGATGTGTTTGCTTTTGGGGCATTTCTGCTGGAAGTAGCAACAGGAAAGAGGCCAATAGAGATTCGAGGGATGATGGAAGATGTAATATTGCTGGATTGGGTATTGTTATGTTGGATGAGAGGAGCCATTGTTGAGGCCAAAGATCCAAAGTTGGGAACAGAGTATGTGACAGAGGAGATGGAAATGGTTCTGAAACTTGGATTGTTGTGTTCACAATCTAACCCAATGGCGAGGCCAAGCATGAGGCAAATTGTGCAGTACTTGGAAGGAGATGCTGTCATGCCAGAGATGGGTTCTATAGAAACGTTAGGTGGTGGTGGTGGATATGAAGGTTTTGATGATCTTGGCATGTCGTATAATTCTTTTTTGGATAAAGCTATTGCATATTCTACTTCTTCACTTGAAAGAGGTTTTGCCCATTCTTCTGATGCGCAGTCTCTCCTGTCAGGTGGCCGTTGA 2148 40.97 MGSCKFLIAMASNFDRPLRRNGAYDARLHGREMNKNPMFFNLSIVVSLLLVSVVSSAASKGTDFIFHGFQSANLSLDAMAVVTSNGLLKLTNETRQKIGHGFYPNPVNFVDFSHGVSSFSTTFVFAIISEYPNLSGHGIAFVVAPTKTFPGAEPSQHLGIFNDNNNGNTNNHIFAVELDTIQNLELKDIDANHVGIDINGLISKKAETAGFYPSNNGEFRNLSLISGQPMQVWIEYDGINKEINVTLAPINIPKPKIPLLSYVWDLSSVIKNSSMFVGFSSSTGSVSTSHYILGWSFRLNGQAQSLDISRLPKLPQKKHRSKVLTIGLPLISGGIALLVILSIVHVIRRKRKFAELLEDWELDYGPHRFKYKDLYTATNGFKEKEILGSGGFGRVYKGALPKSKLEIAVKRVSHESRQGMKEFVAEIVSLGRLRHRNLVQLLGYCRRKGELLLVYDYMQNGSLDKYLFNETNPSLNWSQRFRIIKGVASGLLYLHEEWEQTVIHRDVKASNVLLDNELNGRLGDFGLARLYDHGTDPQTTHIVGTLGYLAPEHTRSGRPTTQMDVFAFGAFLLEVATGKRPIEIRGMMEDVILLDWVLLCWMRGAIVEAKDPKLGTEYVTEEMEMVLKLGLLCSQSNPMARPSMRQIVQYLEGDAVMPEMGSIETLGGGGGYEGFDDLGMSYNSFLDKAIAYSTSSLERGFAHSSDAQSLLSGGR* 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29333338 29335516 + CsaV3_3G034700.1 Csa03g03164 524069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03164 715 Gene3D Transferase(Phosphotransferase) domain 1 458 659 - -
Csa03g03164 715 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 46 665 - -
Csa03g03164 715 Pfam Legume lectin domain 63 312 IPR001220 GO:0030246
Csa03g03164 715 CDD STKc_IRAK 387 653 - -
Csa03g03164 715 SUPERFAMILY Protein kinase-like (PK-like) 362 655 IPR011009 -
Csa03g03164 715 ProSitePatterns Protein kinases ATP-binding region signature. 387 410 IPR017441 GO:0005524
Csa03g03164 715 SUPERFAMILY Concanavalin A-like lectins/glucanases 62 317 IPR013320 -
Csa03g03164 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Csa03g03164 715 ProSiteProfiles Protein kinase domain profile. 381 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g03164 715 PANTHER - 46 665 - -
Csa03g03164 715 Gene3D Phosphorylase Kinase; domain 1 366 457 - -
Csa03g03164 715 Pfam Protein kinase domain 381 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g03164 715 SMART serkin_6 381 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g03164 715 CDD lectin_legume_LecRK_Arcelin_ConA 62 301 IPR001220 GO:0030246
Csa03g03164 715 Gene3D - 60 312 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g03164 Csa04g01511 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00114 Csa-Chr1:640563 Csa03g03164 Csa-Chr3:29333338 1.77E-175 dispersed
Csa03g03041 Csa-Chr3:28751637 Csa03g03164 Csa-Chr3:29333338 0 dispersed
Csa03g03164 Csa-Chr3:29333338 Csa04g01511 Csa-Chr4:14785016 0 dispersed
Csa05g03156 Csa-Chr5:31379831 Csa03g03164 Csa-Chr3:29333338 1.60E-23 dispersed
Csa03g03163 Csa-Chr3:29330047 Csa03g03164 Csa-Chr3:29333338 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78048 PF00069 Pkinase 1.50E-47 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03164 - - csv:116402748 1367.83