Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03230 ATGGCTTCCGCAGACGTGCAAGAAATTCCACCTCCGTCCTTGGATGCCACCGCCGAACAACCTCCCTTGTTTGATGGAACTACCAGGTTGTATACTGCTTACATTTGCCCTTATGCACACCGTGCTTGGATCATCCGAAATTACAAGGGACTACAACATAAAATTAAGCTAGTTCCTCTCGATCTTCGTAATAGACCTGACTGGTATAAGGAAAAAGTATACCCTACGAACAAGGTTCCATCTCTGGAACATAATGGAAAGGTTATTGGAGAAAGTCTTGATCTGCTCAAATATATCGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGATCCTGGTAAAAGAGAATTTGCTGAAGAGTTGCTTTCCTACAGCGAAACATTTAACGGCGCTATAATCCATTCGTTCAAAGGCGACACCGCAAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAACGCTTTGGGACAATTTGATGGCCCGTTCCTCGTCGGAGAAATCAGTCAGGTGGATATAGCATACATTCCATTTGTTGAAAGGTTCCACATTTTCTTATTAGAGGCTCTCAATATTGACATCACGGAAGGAAGGCCCAAATTAGTTGCATGGATTGAGGAGTTCAATAAGATGGATGCGTACAAGCAAACAAAAGTCGATCCCAAGCTGGTCGTTGACATTTATACAATGTATGCCATTATTATCAAAATCAAGCACATCAATTAG 726 42.15 MASADVQEIPPPSLDATAEQPPLFDGTTRLYTAYICPYAHRAWIIRNYKGLQHKIKLVPLDLRNRPDWYKEKVYPTNKVPSLEHNGKVIGESLDLLKYIDSNFEGPSLLPDDPGKREFAEELLSYSETFNGAIIHSFKGDTAKEAGAQFDYLENALGQFDGPFLVGEISQVDIAYIPFVERFHIFLLEALNIDITEGRPKLVAWIEEFNKMDAYKQTKVDPKLVVDIYTMYAIIIKIKHIN* 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29677457 29680745 + CsaV3_3G035360.1 Csa03g03230 524135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03230 241 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Csa03g03230 241 SFLD Glutathione Transferase (cytosolic) 29 208 IPR040079 -
Csa03g03230 241 SUPERFAMILY Thioredoxin-like 21 108 IPR036249 -
Csa03g03230 241 SFLD Main (cytGST) 29 208 - -
Csa03g03230 241 MobiDBLite consensus disorder prediction 1 21 - -
Csa03g03230 241 Gene3D Glutaredoxin 1 104 - -
Csa03g03230 241 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 3 228 - -
Csa03g03230 241 Gene3D - 105 234 - -
Csa03g03230 241 SUPERFAMILY GST C-terminal domain-like 103 231 IPR036282 -
Csa03g03230 241 Pfam Glutathione S-transferase, C-terminal domain 144 206 - -
Csa03g03230 241 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Csa03g03230 241 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 228 IPR044629 GO:0004364
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03227 Csa-Chr3:29660892 Csa03g03230 Csa-Chr3:29677457 1.16E-121 dispersed
Csa03g03230 Csa-Chr3:29677457 Csa05g00645 Csa-Chr5:4299122 2.45E-106 dispersed
Csa03g03229 Csa-Chr3:29669445 Csa03g03230 Csa-Chr3:29677457 2.90E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03230 K00799 - csv:101210504 473.781