Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03263 ATGGCGGCCAAAACCCATTTCAGCTTTCTTCTTCTTCTTGTTCTTTTTCAGCTCTTTAATTCAGGAAGGGGCCAGTTGCAACTGAATTACTATGCAAAAAGTTGTCCAAAAGCTGAAGAGATTATAAAACAGCAAGTCATTGATCTTTACTATGAACATGGAAACACTGCTGTTTCGTGGCTTAGAAATCTCTTCCATGATTGCATTGTTAAGTCTTGTGATGCGTCACTTCTGTTGGAGACGGTGGTGGGAGTGGAATCAGAGAAAGATTCAAGCAGAAGCTTTGGAATGAGAAATTTCAAATATGTAAATAAGATTAAAGCTGCTGTTGAGAAAGAGTGCCCTCTCACTGTTTCTTGTGCTGACATCGTTGCTCTCTCTGCTAGAGATGGCATAGTTATGTTAAAAGGACCTCATATAGATTTGAAAACCGGAAGAAAAGACAGCAAAATGAGTTATTCAAATATGGTTGAGGAGTTGGTTCCACAGCACAACGCATCTCTTGTAAATGTTCTCTCTCGTTTTAACTCCATTGGTATTGATACTGAAGCAACAGTCGCCCTTTTAGGATCTCACTCAGTCGGTCGAGTTCATTGCGTAAACTTAGTCGAAAGACTATATCCAACTGTCGATCCCACCATCGATCCAGAATATGCCAAATACCTAAAGATGCGATGTCCAACACCAACTCCTGATCCAAACGGAGTATTGTATTCAAGAAACGACCGTGAAACTACGATGATTCTCGATAACATGTACTACAGTAACGTACTAAAACACAAAGGATTGCTCATAGTGGACCAAGAATTGGTTTCTAATCCTTTAACTTTACCTTACGTCAAGAAATTTGCTGCTGACAATCTCTACTTTCATGCCCAATTCTCAAGGGGCATTCGTTTGTTATCTGAGAACAATCCCCTCACTGGAGATCAAGGAGAGGTTAGGAAAGATTGTCGCTTTGTTAATAAGTAA 972 39.92 MAAKTHFSFLLLLVLFQLFNSGRGQLQLNYYAKSCPKAEEIIKQQVIDLYYEHGNTAVSWLRNLFHDCIVKSCDASLLLETVVGVESEKDSSRSFGMRNFKYVNKIKAAVEKECPLTVSCADIVALSARDGIVMLKGPHIDLKTGRKDSKMSYSNMVEELVPQHNASLVNVLSRFNSIGIDTEATVALLGSHSVGRVHCVNLVERLYPTVDPTIDPEYAKYLKMRCPTPTPDPNGVLYSRNDRETTMILDNMYYSNVLKHKGLLIVDQELVSNPLTLPYVKKFAADNLYFHAQFSRGIRLLSENNPLTGDQGEVRKDCRFVNK* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29846147 29849402 - CsaV3_3G035690.1 Csa03g03263 524168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03263 323 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 Pfam Peroxidase 43 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 Gene3D Peroxidase, domain 2 162 301 - -
Csa03g03263 323 PANTHER PEROXIDASE 25-RELATED 14 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Csa03g03263 323 PANTHER PEROXIDASE 21 14 320 - -
Csa03g03263 323 Gene3D - 29 322 - -
Csa03g03263 323 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g03263 323 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03263 Csa-Chr3:29846147 Csa06g03285 Csa-Chr6:27565675 2.49E-70 dispersed
Csa01g01078 Csa-Chr1:6689353 Csa03g03263 Csa-Chr3:29846147 7.05E-131 transposed
Csa03g03263 Csa-Chr3:29846147 Csa06g02555 Csa-Chr6:22639940 1.41E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03263 K00430 - csv:101215428 640.188