Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03356 ATGGCAAATACATCCTCGAAGACCGGTAATTTTGAGCCAATGTTTTTTAAAGTTGGCATTCCCTTAGCTATATCTGCAGCAGGTGGTATATGTGGTATAATGATGGCAAAAGGTTCCTTTCCATCTTCCTTAAATTTCTTCAAACCCAAATCAAAGCTCATGGAAAATGAGAACTTTCAGCCATCTTCAATCACTTCAGAGGAAGAAAAAACTTCACAACCCAATGCTGAAGAAGTGATTCTAAGCTTAAAAACCAGAGTTGAAGATCTTGAAAGTAAAGAATTGGATATAGAGAGGCAATTCATTTGGTACCAAAATCTAAAAGAAAGAGAAGCTTTATTAGTGGAGCTTAGAAACACTTTGGTCTTGGATATGGCTCATATAAACTTCTTGGAAAGGGAAATTTTGTTAATGGGAGAAGAAAACAGGAGGTTTGAGAATTTGGTGACAGAATATTTGGGAGTCTCAGAGCAACTTGAAGGTCAAAAAACAGAAAATAAGTTACTTGAGAGAGAAGTAAGGAAACTTAAGAAGAGATTGAAGGAACAATCAAAGATGATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAATCACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATGATTGAGAGATTGGGGAATGAAGTAAAAGAGCTGAAAATACAAATGGATCATCAATTGGAAGAGGAGAATAACCAAAATTTGTGCACAATAAAGAATGGAACAGAAAAAGCAGTAACAATGGAGGATTTGAACAAGCTTTCAAATGAATTCAATCAATTGAAGGATGAATTTGAGGTGTTTAGAAAGCAAGAACAAGAACAAGAACAAGAAGGCCAGAAAGAAAATCCGAAGAAAGAAGAAAGAGATAACAAAGCTTTGAATCAAAACGAATCATCATCTGATGAAACTAATTACACAAGGCCAAAGCTTCTTCGAAGGATGGGTTGTGTTAGGGGAAACGAAAAGATGAAAAGGAAAACAAGACCAGAATAA 1014 34.71 MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQPSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKIQMDHQLEEENNQNLCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKALNQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE* 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30371955 30373431 - CsaV3_3G036620.1 Csa03g03356 524261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03356 337 MobiDBLite consensus disorder prediction 321 337 - -
Csa03g03356 337 Coils Coil 250 284 - -
Csa03g03356 337 MobiDBLite consensus disorder prediction 276 337 - -
Csa03g03356 337 PANTHER CHUP1-LIKE PROTEIN 1 270 - -
Csa03g03356 337 Coils Coil 80 100 - -
Csa03g03356 337 MobiDBLite consensus disorder prediction 276 302 - -
Csa03g03356 337 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 270 IPR040265 -
Csa03g03356 337 Coils Coil 208 235 - -
Csa03g03356 337 Coils Coil 159 200 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03356 Csa-Chr3:30371955 Csa07g02433 Csa-Chr7:22242425 2.65E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03356 - - csv:101221522 636.721