Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03361 ATGGGGGCCTCGCTCTCGAATATGGGTGAAGCTGTTAATGGCTCCACCATCGGTCCTGGCCTCGGGGATATACCAGAGAACTGTGTGGCACGTGTTTTTCTTCACCTTACTCCGCCGGAGATTTGTAACCTTGCGCGGCTTAACAGAGCGTTTCGCGGCGCCGCCTCGTCGGATGCTGTTTGGGAATCGAAATTGCCTTCAAATTATCAAGATCTTCTGGATTTCTTGCCTCCCGAACGGTATCAAAATCTGTCAAAGAAGGACATATACGCGCTGCTATCTCGTCCTGTGCCATTCGATGATGGAAATAAGGAGGTGTGGTTGGACAGAATTACTGGAAGGATTTGCATGTCGATATCAGCGAAGGGCATGGCTATAACTGGAATTGATGATAGAAGATACTGGAATTGGATTCCTACTGATGAATCTCGGTTCAATGTTGTGGCATATCTGCAGCAAATTTGGTGGTTTGAAGTAGATGGGATGGTGAAATTTCCTTTTCCTGCTGATATCTATACACTGACCTTCAGGCTTCACCTTGGAAGGTTCTACAAGCGGCTAGGCCGACGTGTATGCAGCTTCGAGCATACTCACGGTTGGGATGTAAAGCCTGTACGGTTTGAAATGTCTACTTCTGATGGACAGCAAGCAACGCACGAATTCTGTTTAGACGAGCACGGATTTATTGATGTAAGTGGACACCGCAAGCGGGGGTCATGGATAGAATATAAGGTAGGTGAGTTTTTGGTCAACAAGTCGGGATCAACCACGGAAATTAGATTTTCCATGAAACAGATCGACTGCACGCATTCTAAAGGCGGACTTTGTGTAGATTCTGTATTTATCATTCCCAGCATCTTGAAAGAGCGGAAAAGATGA 879 46.42 MGASLSNMGEAVNGSTIGPGLGDIPENCVARVFLHLTPPEICNLARLNRAFRGAASSDAVWESKLPSNYQDLLDFLPPERYQNLSKKDIYALLSRPVPFDDGNKEVWLDRITGRICMSISAKGMAITGIDDRRYWNWIPTDESRFNVVAYLQQIWWFEVDGMVKFPFPADIYTLTFRLHLGRFYKRLGRRVCSFEHTHGWDVKPVRFEMSTSDGQQATHEFCLDEHGFIDVSGHRKRGSWIEYKVGEFLVNKSGSTTEIRFSMKQIDCTHSKGGLCVDSVFIIPSILKERKR* 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30409117 30413348 - CsaV3_3G036670.1 Csa03g03361 524266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03361 292 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Csa03g03361 292 Pfam Phloem protein 2 115 284 IPR025886 -
Csa03g03361 292 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 291 - -
Csa03g03361 292 PANTHER F-BOX PROTEIN PP2-A15 1 291 - -
Csa03g03361 292 SUPERFAMILY F-box domain 8 91 IPR036047 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00373 Csa-Chr3:3156341 Csa03g03361 Csa-Chr3:30409117 6.64E-104 dispersed
Csa03g03361 Csa-Chr3:30409117 Csa05g00583 Csa-Chr5:3849339 1.10E-96 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03361 - - csv:101206359 612.068