Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03365 ATGGAGCTTGAAATTATTGCAGGGTTTATTTTACTATTATTTTTATGGGGTTTATGGCTGTGGCGCTGCCGTGGAGCGGGGGCCGATCGGCAACTTCCACCAGGGCCGCCATGTTGGCCGGTAGTTGGAAATTTGCTCCAACTAAGTTTTTCTGCTCACGAATCCTTCACAAAACTCGCTGCTAAGTATGGCCCAATCATGACCCTCCAACTCGGATCAATGAAAACAGTGGTAGTTTCCTCAAGCACGGTGGCGCGTGAGATGTTCAAAACACACGACGTGCCTCTCTCAGGACGAATGATATACGAAGCAATGAAAGGAAACCACGGCACACAAGGCTCCCTAATCACTTCCCAATACGGTCCTCACTGGCGGATGCTACGACGACTTGCCACATCGGAGTTCTTCGTTGCCCGCCAGCTCGAATCCATGAAACATGTCCGCCGCCACTGCATCGACGCCATGATACGCCACGTCGAGGAGGGATGCGACCCGTGTGGGAACGCTCCGGCGTTGGACGTGGGGAAATTCGTGTTCGTAATGGGCTTTAACTTAATTGGGAATTTGATATTTTCGAAAGATTTATTGGAGGCAAACTCGAAGAGGGGAAAGGAATTTTATTACCATACGAGAAAGGTAATGGAGATGGCCGGAAAGCCGAATGTGGCGGACTTTTTGCCGGCGTTACGGTGGTTGGATCCGCAAGGGATAAGGAGGAAGACGCAATTTCATGTGAATAAAGCGTTTGAAATTGCTGGGGAATTTATAAAGGAGAGATTATTAATAAGGGAAAAAAGGGATATTATTAATGATGATGATGATGAGAAAAAAGAAGAAAGTGGGAAAAAAGATTACTTGGATGTGCTTTTGGAGTTTCGTGGCGATGGAGTTGAGGAGCCTTCTCGTTTCTCCTCTTGGATCATCAACGTTATCGTCCTCGAAATGTTCACGGCAGGGACAGACACAACCACCAGTACATTAGAGTGGGCAATGGCGGAGCTCCTCCACAACCCAGCGTCGCTGCAGAAACTTCAGGCGGAGCTACGAGCCACCATTGCGCCGAACGACAATCTCGAAGAAACCCATCTCCAAAATCTCCCATATCTGGACGCCGTCGTCAAAGAAACCCTTCGCCTCCACCCGCCGCTGCCGTTCCTCTTTCCGAGAATGGCCATGAAGCCTTGCAACATCCTCGGCTATCGTATTCCGGCTGAAACCCAAGTCTTAGTCAACTTTTGGGCCATCGGACGTGACCCCAAAAACTGGAAAGATGCTTTAGTTTTCTCGCCGGAGAGATTCTTTGATCCCTCCTCCGGCAGCAAGGATTTCAAAGGTCAACACTTTGACTTCATTCCTTTTGGCTCCGGGCGCCGTATGTGCCCGGCGGTGCCACTGGCATCGAGAGTTCTTCCTATGGCTTTGGGGTCGTTGATTTTATCGTTTGATTGGGCTTTGCCGGACGGAGTTTCGCCGAAGGAGATGGACATGTCGGAGCAAATGGGAATTACTCTACGAAAGAAGGTTCCTTTGAAGGCTATTCCGACTCCTCACAAACGACGTCGTTTTGATTAA 1572 49.36 MELEIIAGFILLLFLWGLWLWRCRGAGADRQLPPGPPCWPVVGNLLQLSFSAHESFTKLAAKYGPIMTLQLGSMKTVVVSSSTVAREMFKTHDVPLSGRMIYEAMKGNHGTQGSLITSQYGPHWRMLRRLATSEFFVARQLESMKHVRRHCIDAMIRHVEEGCDPCGNAPALDVGKFVFVMGFNLIGNLIFSKDLLEANSKRGKEFYYHTRKVMEMAGKPNVADFLPALRWLDPQGIRRKTQFHVNKAFEIAGEFIKERLLIREKRDIINDDDDEKKEESGKKDYLDVLLEFRGDGVEEPSRFSSWIINVIVLEMFTAGTDTTTSTLEWAMAELLHNPASLQKLQAELRATIAPNDNLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCNILGYRIPAETQVLVNFWAIGRDPKNWKDALVFSPERFFDPSSGSKDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGSLILSFDWALPDGVSPKEMDMSEQMGITLRKKVPLKAIPTPHKRRRFD* 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30433846 30437080 + CsaV3_3G036710.1 Csa03g03365 524270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03365 523 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PANTHER CYTOCHROME P450 76A1-LIKE 1 517 - -
Csa03g03365 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Csa03g03365 523 PANTHER CYTOCHROME P450 FAMILY 1 1 517 - -
Csa03g03365 523 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 Pfam Cytochrome P450 33 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 Gene3D Cytochrome P450 24 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03365 523 SUPERFAMILY Cytochrome P450 33 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03365 Csa-Chr3:30433846 Csa05g00347 Csa-Chr5:2223926 4.63E-121 dispersed
Csa03g03365 Csa-Chr3:30433846 Csa01g00905 Csa-Chr1:5635608 2.16E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03365 - - csv:101222700 1007.28