Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03386 ATGGACGATCAATATCCCCTCTCCGATCTCCGCCACCTCTTGAGTACGCCTCCATCTCGTTCCCATTTCCCTTCTTCTTCCTCAATTCCCCACCATGATCTCTCCTCCTCCGCCTTTCGCCACCACCATACTCCCTACGACCTCATCATGATGATGCCACGCGACACTCCCCTCCCCGACTTTCGCTCCGATTCCACCACTACACCATCTGCTTCCATACTCTCCCCTCACCCTGTTCACAACGCTTTCGACCCCGAAACCGCGTCCATCGCTGCCGACTGCGCTACAGCTCGATGGCCTCGACAAGAAACCCTTACGCTCTTGGAAATTAGATCTCGACTTGATTCTAAGTTCAAAGAAGCTAACCAAAAAGGCCCCCTTTGGGATGAAGTTTCTAGAATTATGGCTGAGGAACACAATTATCAAAGAAGTGGGAAAAAATGCAGAGAAAAGTTTGAGAATTTATATAAATATTACAAAAAAACAAAGGAAGGCAAAGCTGGAAGACAAGATGGTAAGAATTACAGATTCTTTAGGCAATTGGAAGCTCTCTATGGTGAAACAAGCAATTCTCCTTCACTTCCAGATTCCCATTTTGTTGGAGACACAAACCTCAGATTCCAACAAAATGGAACTAACAATCCAACCGCCTCCGCTCCGATGAGCCACGAAGCTCACCAGAAGCATTACTGCGATAGCCTTAGCCTATCCAACACCTCCGAGTTTGAAACCTCGGCTTCATCAGATGGCAATGACGACCTCGGCTCAGTTGGTGTAATGGATAACGATTCAATGGAGAAAAGAAGGAAGAAGCGAGGCGGAAAATGCTGGAAGGCTAAAATTAAACAGTTCATCGACTCGCAAATGAGGAAGCTAATTGATAAACAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAAAAGGAGAGAATGATTCGGGATGAGGAATGGAGAAGACAAGAAGTGTCAAGAATGGATAGGGAGAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAATCTAGAGATGCGGCATTAATGGATGCATTACAAAGGCTAACAGGAAGAGAATTGAGAGATAATAATCAATACAACTCCTCGCCTGACCACGGATTAATTGTAGCCGAGCATCATCGAAACAATAACGAGAATCAAAACGAAGACGGGAGCGAAATACTAAACAACAACACAGCTAGAGAATTATTAGCAGACAACAACGATAATTACCAAAGGAAAATAATTGATAATCATGGCAACAAGAAACGCAAGGAGAATTCAACATCAACAACCACCACCTACAATCTTTACTTCCAACAACACACAGATTCCTCCCTCTATAGCCGTGGCGGTGGCGGACAGTACGACGGTGCCACCCACATCAAGGAACAAAGTCCAAATAGTTCGAACGCAGGTGGCAGCGGTGGTGGTCATGTGGTGCAAGATAACTGCTTCAGGTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTGTGGGAAAATTTTGGCCTCAAACTCAACAATGGAAGTGACCAAACTTGA 1554 45.11 MDDQYPLSDLRHLLSTPPSRSHFPSSSSIPHHDLSSSAFRHHHTPYDLIMMMPRDTPLPDFRSDSTTTPSASILSPHPVHNAFDPETASIAADCATARWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETSNSPSLPDSHFVGDTNLRFQQNGTNNPTASAPMSHEAHQKHYCDSLSLSNTSEFETSASSDGNDDLGSVGVMDNDSMEKRRKKRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKERMIRDEEWRRQEVSRMDRERSFWAKERAWIESRDAALMDALQRLTGRELRDNNQYNSSPDHGLIVAEHHRNNNENQNEDGSEILNNNTARELLADNNDNYQRKIIDNHGNKKRKENSTSTTTTYNLYFQQHTDSSLYSRGGGGQYDGATHIKEQSPNSSNAGGSGGGHVVQDNCFRFLMGEGDQSQSGLWENFGLKLNNGSDQT* 518
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 30539205 30542320 - CsaV3_3G036920.1 Csa03g03386 524291

Annotation


Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03386 517 CDD GT1 98 163 - -
Csa03g03386 517 PANTHER - 16 404 - -
Csa03g03386 517 PANTHER - 419 504 - -
Csa03g03386 517 MobiDBLite consensus disorder prediction 241 272 - -
Csa03g03386 517 MobiDBLite consensus disorder prediction 448 479 - -
Csa03g03386 517 MobiDBLite consensus disorder prediction 1 36 - -
Csa03g03386 517 Pfam Myb/SANT-like DNA-binding domain 98 184 IPR044822 -
Csa03g03386 517 ProSiteProfiles Myb-like domain profile. 98 156 IPR001005 -
Csa03g03386 517 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 16 404 - -
Csa03g03386 517 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 419 504 - -
Csa03g03386 517 Coils Coil 293 320 - -
Csa03g03386 517 Gene3D - 99 161 - -
Csa03g03386 517 MobiDBLite consensus disorder prediction 463 479 - -
Csa03g03386 517 MobiDBLite consensus disorder prediction 14 34 - -
       

Pathway


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03386 - - - csv:101209675 999.579
       

Dupl-types


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03386 Csa-Chr3:30539205 Csa05g02745 Csa-Chr5:28184757 5.26E-85 dispersed
Csa03g03386 Csa-Chr3:30539205 Csa03g03064 Csa-Chr3:28871011 1.18E-07 transposed
       

Deco-Alignment


Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g1031 Blo01g01204 . Bda01g00388 Bda03g00704 . Bpe03g01248 Bma04g01593 Bma10g00079 Cmo06g00452 Cmo14g00274 . . . . . . Cpe08g01037 . . . . . . . . . . . . . . . Cone10ag0183 Cone13ag1208 Cone19ag1193 . . . Cme04g02428 Blo07g01354 Blo09g00515 Bda03g01683 . . Bpe02g00754 Bma01g01961 . Sed02g0557 . . Cma06g00453 Cma14g00286 Car06g00394 Car14g00256 Cpe03g00245 . Bhi11g01969 Tan08g1764 Cmetu04g1047 Lac10g2908 Hepe05g0345 . . Cla10g01831 Cam10g1891 Cec10g1946 Cco10g1917 Clacu10g1906 Cmu10g2652 Cre10g2041 Lsi03g01930 Csa03g03386 Chy04g01960 .
       

Syn-Families


Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa02g00136 CCT 65 423 Trihelix Transcription Factor Family AT1G12040 65.1 2.6e-43 174.1
Csa01g02065 CCT 8 218 Trihelix Transcription Factor Family AT1G12040 57.8 5.6e-38 156.4
Csa02g00136 CCT 47 423 Trihelix Transcription Factor Family AT4G18670 81.0 3.3e-66 250.4
Csa01g02065 CCT 23 391 Trihelix Transcription Factor Family AT4G18670 83.8 1.1e-64 245.4
Csa06g00076 . 26 224 Trihelix Transcription Factor Family AT4G18670 57.8 3.3e-42 170.6
Csa06g00075 . 15 224 Trihelix Transcription Factor Family AT4G18670 56.7 4.8e-41 166.8
Csa06g00077 . 15 224 Trihelix Transcription Factor Family AT4G18670 56.7 4.8e-41 166.8
Csa06g00073 . 33 157 Trihelix Transcription Factor Family AT4G18670 61.9 1.4e-37 155.2
Csa06g00076 . 13 419 Trihelix Transcription Factor Family AT3G19020 65.3 2.1e-58 224.6
Csa06g00073 . 32 421 Trihelix Transcription Factor Family AT3G19020 63.5 1.6e-53 208.4
Csa06g00075 . 13 224 Trihelix Transcription Factor Family AT3G19020 63.7 7.3e-51 199.5
Csa06g00077 . 13 224 Trihelix Transcription Factor Family AT3G19020 63.7 7.3e-51 199.5
Csa01g02065 CCT 2 218 Trihelix Transcription Factor Family AT3G19020 67.6 1.6e-42 171.8
Csa02g00136 CCT 42 239 Trihelix Transcription Factor Family AT3G19020 66.0 1.2e-40 165.6
Csa06g00076 . 67 400 Trihelix Transcription Factor Family AT1G49490 69.6 1.6e-49 194.9
Csa06g00073 . 69 402 Trihelix Transcription Factor Family AT1G49490 65.8 2.7e-44 177.6
Csa06g00075 . 6 224 Trihelix Transcription Factor Family AT1G49490 55.3 9.6e-42 169.1
Csa06g00077 . 6 224 Trihelix Transcription Factor Family AT1G49490 55.3 9.6e-42 169.1
Csa01g02065 CCT 55 392 Trihelix Transcription Factor Family AT1G49490 75.7 8.1e-41 166.0
Csa02g00136 CCT 76 408 Trihelix Transcription Factor Family AT1G49490 73.6 1.1e-40 165.6
Csa06g00073 . 32 425 Trihelix Transcription Factor Family AT2G15880 63.7 4.5e-64 243.0
Csa06g00076 . 26 400 Trihelix Transcription Factor Family AT2G15880 67.4 1.7e-63 241.1
Csa06g00075 . 26 225 Trihelix Transcription Factor Family AT2G15880 63.5 4.1e-49 193.4
Csa06g00077 . 26 225 Trihelix Transcription Factor Family AT2G15880 63.5 4.1e-49 193.4
Csa01g02065 CCT 25 396 Trihelix Transcription Factor Family AT2G15880 68.6 1.4e-41 168.3
Csa02g00136 CCT 47 423 Trihelix Transcription Factor Family AT2G15880 64.8 2.0e-40 164.5
Csa06g00076 . 13 411 Trihelix Transcription Factor Family AT4G33970 64.4 1.1e-59 228.4
Csa06g00073 . 29 413 Trihelix Transcription Factor Family AT4G33970 63.1 1.6e-55 214.5
Csa06g00075 . 13 225 Trihelix Transcription Factor Family AT4G33970 56.3 1.1e-43 175.3
Csa06g00077 . 13 225 Trihelix Transcription Factor Family AT4G33970 56.3 1.1e-43 175.3
Csa02g01808 . 1 202 Trihelix Transcription Factor Family AT1G13450 62.9 6.1e-68 254.2
Csa03g03064 CCT 56 304 Trihelix Transcription Factor Family AT5G01380 60.1 1.9e-54 209.9
Csa05g00132 . 95 607 Trihelix Transcription Factor Family AT1G33240 52.4 6.9e-87 318.5
Csa02g00136 CCT 47 423 Trihelix Transcription Factor Family AT4G18670 81.0 3.3e-66 250.4
Csa01g02065 CCT 23 391 Trihelix Transcription Factor Family AT4G18670 83.8 1.1e-64 245.4
Csa06g00076 . 26 224 Trihelix Transcription Factor Family AT4G18670 57.8 3.3e-42 170.6
Csa06g00075 . 15 224 Trihelix Transcription Factor Family AT4G18670 56.7 4.8e-41 166.8
Csa06g00077 . 15 224 Trihelix Transcription Factor Family AT4G18670 56.7 4.8e-41 166.8
Csa06g00073 . 33 157 Trihelix Transcription Factor Family AT4G18670 61.9 1.4e-37 155.2
Csa06g00076 . 13 411 Trihelix Transcription Factor Family AT4G33970 64.4 1.1e-59 228.4
Csa06g00073 . 29 413 Trihelix Transcription Factor Family AT4G33970 63.1 1.6e-55 214.5
Csa06g00075 . 13 225 Trihelix Transcription Factor Family AT4G33970 56.3 1.1e-43 175.3
Csa06g00077 . 13 225 Trihelix Transcription Factor Family AT4G33970 56.3 1.1e-43 175.3
Csa06g00403 . 59 565 Trihelix Transcription Factor Family AT1G76880 59.5 4.3e-113 405.6
Csa06g00402 . 51 490 Trihelix Transcription Factor Family AT1G76880 58.3 8.8e-90 328.2
Csa05g00132 . 95 581 Trihelix Transcription Factor Family AT1G76880 52.4 6.5e-85 312.0
Csa03g03386 . 96 362 Trihelix Transcription Factor Family AT3G10000 53.4 2.5e-63 240.0
Csa06g00076 . 13 419 Trihelix Transcription Factor Family AT3G19020 65.3 2.1e-58 224.6
Csa06g00073 . 32 421 Trihelix Transcription Factor Family AT3G19020 63.5 1.6e-53 208.4
Csa06g00075 . 13 224 Trihelix Transcription Factor Family AT3G19020 63.7 7.3e-51 199.5
Csa06g00077 . 13 224 Trihelix Transcription Factor Family AT3G19020 63.7 7.3e-51 199.5
Csa01g02065 CCT 2 218 Trihelix Transcription Factor Family AT3G19020 67.6 1.6e-42 171.8
Csa02g00136 CCT 42 239 Trihelix Transcription Factor Family AT3G19020 66.0 1.2e-40 165.6
Csa06g00076 . 67 400 Trihelix Transcription Factor Family AT1G49490 69.6 1.6e-49 194.9
Csa06g00073 . 69 402 Trihelix Transcription Factor Family AT1G49490 65.8 2.7e-44 177.6
Csa06g00075 . 6 224 Trihelix Transcription Factor Family AT1G49490 55.3 9.6e-42 169.1
Csa06g00077 . 6 224 Trihelix Transcription Factor Family AT1G49490 55.3 9.6e-42 169.1
Csa01g02065 CCT 55 392 Trihelix Transcription Factor Family AT1G49490 75.7 8.1e-41 166.0
Csa02g00136 CCT 76 408 Trihelix Transcription Factor Family AT1G49490 73.6 1.1e-40 165.6
Csa05g03083 . 323 711 Trihelix Transcription Factor Family AT1G68690 63.9 1.5e-138 490.3
Csa05g02558 . 279 655 Trihelix Transcription Factor Family AT1G68690 65.6 2.8e-137 486.1
Csa05g02336 . 293 679 Trihelix Transcription Factor Family AT1G68690 59.4 1.6e-124 443.7
Csa01g01727 CCT 251 539 Trihelix Transcription Factor Family AT1G68690 66.1 2.1e-113 406.8
Csa02g00125 CCT 284 571 Trihelix Transcription Factor Family AT1G68690 64.9 4.0e-112 402.5
Csa02g01248 . 292 579 Trihelix Transcription Factor Family AT1G68690 63.7 3.3e-106 382.9
Csa04g00511 . 273 560 Trihelix Transcription Factor Family AT1G68690 60.2 4.9e-102 369.0
Csa04g00130 . 352 640 Trihelix Transcription Factor Family AT1G68690 55.5 1.6e-84 310.8
Csa03g02648 . 359 639 Trihelix Transcription Factor Family AT1G68690 56.7 2.1e-84 310.5
Csa03g04090 . 393 671 Trihelix Transcription Factor Family AT1G68690 54.8 4.6e-84 309.3
Csa01g02931 . 638 919 Trihelix Transcription Factor Family AT1G68690 55.4 1.3e-81 301.2
Csa07g02390 . 492 773 Trihelix Transcription Factor Family AT1G68690 54.4 3.4e-79 293.1
Csa03g01426 . 76 360 Trihelix Transcription Factor Family AT1G68690 51.4 3.2e-77 286.6
Csa06g00794 . 71 355 Trihelix Transcription Factor Family AT1G68690 50.3 7.2e-77 285.4
Csa03g03235 . 46 350 Trihelix Transcription Factor Family AT1G68690 50.8 2.7e-76 283.5
Csa04g02704 . 55 336 Trihelix Transcription Factor Family AT1G68690 50.2 4.6e-76 282.7
Csa05g00641 . 67 351 Trihelix Transcription Factor Family AT1G68690 50.7 1.8e-75 280.8
Csa07g01190 . 717 993 Trihelix Transcription Factor Family AT1G68690 50.4 1.3e-70 264.6
Csa05g02558 . 279 601 Trihelix Transcription Factor Family AT1G26150 66.8 5.3e-117 418.7
Csa05g03083 . 324 657 Trihelix Transcription Factor Family AT1G26150 64.6 3.4e-116 416.0
Csa05g02336 . 299 625 Trihelix Transcription Factor Family AT1G26150 58.3 2.6e-100 363.2
Csa01g01727 CCT 203 485 Trihelix Transcription Factor Family AT1G26150 60.0 8.0e-97 351.7
Csa02g00125 CCT 283 517 Trihelix Transcription Factor Family AT1G26150 68.1 4.0e-96 349.4
Csa02g01248 . 293 524 Trihelix Transcription Factor Family AT1G26150 68.2 1.4e-93 340.9
Csa04g00511 . 273 506 Trihelix Transcription Factor Family AT1G26150 65.1 1.2e-92 337.8
Csa01g02931 . 631 868 Trihelix Transcription Factor Family AT1G26150 59.2 9.2e-77 285.0
Csa03g04090 . 386 621 Trihelix Transcription Factor Family AT1G26150 55.5 1.9e-74 277.3
Csa04g00130 . 353 589 Trihelix Transcription Factor Family AT1G26150 59.7 1.2e-73 274.6
Csa03g03235 . 31 290 Trihelix Transcription Factor Family AT1G26150 53.1 3.6e-73 273.1
Csa07g01264 . 126 370 Trihelix Transcription Factor Family AT1G26150 52.8 5.2e-72 269.2
Csa07g02390 . 466 722 Trihelix Transcription Factor Family AT1G26150 53.3 1.2e-71 268.1
Csa02g01935 . 169 398 Trihelix Transcription Factor Family AT1G26150 53.5 7.5e-71 265.4
Csa06g01959 . 59 288 Trihelix Transcription Factor Family AT1G26150 56.1 2.9e-70 263.5
Csa05g00977 . 720 949 Trihelix Transcription Factor Family AT1G26150 54.3 6.4e-70 262.3
Csa06g01183 . 170 399 Trihelix Transcription Factor Family AT1G26150 55.6 8.3e-70 261.9
Csa03g00872 . 146 375 Trihelix Transcription Factor Family AT1G26150 52.2 1.4e-69 261.2
Csa06g00794 . 67 302 Trihelix Transcription Factor Family AT1G26150 54.2 1.8e-69 260.8
Csa03g01426 . 74 307 Trihelix Transcription Factor Family AT1G26150 55.6 7.0e-69 258.8
Csa05g00641 . 67 298 Trihelix Transcription Factor Family AT1G26150 56.0 7.0e-69 258.8
Csa06g02950 . 175 404 Trihelix Transcription Factor Family AT1G26150 51.3 2.0e-68 257.3
Csa07g01177 . 182 411 Trihelix Transcription Factor Family AT1G26150 54.7 2.0e-68 257.3
Csa01g01277 . 78 321 Trihelix Transcription Factor Family AT1G26150 53.3 4.6e-68 256.1
Csa07g01190 . 717 946 Trihelix Transcription Factor Family AT1G26150 55.2 5.9e-68 255.8
Csa06g00019 . 162 390 Trihelix Transcription Factor Family AT1G26150 54.8 7.8e-68 255.4
Csa04g00173 . 13 257 Trihelix Transcription Factor Family AT1G26150 50.6 1.7e-67 254.2
Csa04g02704 . 55 284 Trihelix Transcription Factor Family AT1G26150 53.9 2.3e-67 253.8
Csa07g01499 . 98 332 Trihelix Transcription Factor Family AT1G26150 52.3 1.1e-66 251.5
Csa06g02561 . 30 267 Trihelix Transcription Factor Family AT1G26150 50.8 1.6e-65 247.7
Csa01g02799 . 130 362 Trihelix Transcription Factor Family AT1G26150 50.2 3.1e-64 243.4
Csa05g01091 . 694 928 Trihelix Transcription Factor Family AT1G26150 51.9 5.2e-64 242.7
Csa05g03065 . 282 521 Trihelix Transcription Factor Family AT1G26150 50.2 8.9e-64 241.9
Csa05g01367 . 269 496 Trihelix Transcription Factor Family AT1G26150 50.4 5.8e-63 239.2
Csa03g01694 . 1018 1247 Trihelix Transcription Factor Family AT1G26150 50.9 7.5e-63 238.8
Csa06g00289 . 292 524 Trihelix Transcription Factor Family AT1G26150 50.6 1.7e-62 237.7
Csa03g04036 . 62 296 Trihelix Transcription Factor Family AT1G26150 50.2 3.7e-62 236.5
Csa03g01952 . 772 1000 Trihelix Transcription Factor Family AT1G26150 51.5 4.9e-62 236.1
Csa07g00530 . 251 483 Trihelix Transcription Factor Family AT1G26150 51.1 6.4e-62 235.7
Csa05g02336 . 297 575 Trihelix Transcription Factor Family AT1G23540 65.2 6.4e-100 361.7
Csa01g01727 CCT 226 435 Trihelix Transcription Factor Family AT1G23540 67.1 9.9e-77 284.6
Csa04g00511 . 270 457 Trihelix Transcription Factor Family AT1G23540 70.7 7.1e-75 278.5
Csa05g03083 . 430 607 Trihelix Transcription Factor Family AT1G23540 72.5 3.5e-74 276.2
Csa02g00125 CCT 284 467 Trihelix Transcription Factor Family AT1G23540 69.6 2.3e-73 273.5
Csa02g01248 . 289 476 Trihelix Transcription Factor Family AT1G23540 67.0 1.6e-71 267.3
Csa05g02558 . 365 551 Trihelix Transcription Factor Family AT1G23540 67.4 8.1e-71 265.0
Csa07g01177 . 169 361 Trihelix Transcription Factor Family AT1G23540 52.6 5.8e-53 205.7
Csa06g01183 . 142 349 Trihelix Transcription Factor Family AT1G23540 50.7 1.3e-52 204.5
Csa03g04035 . 642 824 Trihelix Transcription Factor Family AT1G23540 53.6 2.9e-52 203.4
Csa07g01264 . 142 321 Trihelix Transcription Factor Family AT1G23540 53.9 2.9e-52 203.4
Csa02g01935 . 158 348 Trihelix Transcription Factor Family AT1G23540 51.0 1.9e-51 200.7
Csa03g02986 . 615 797 Trihelix Transcription Factor Family AT1G23540 52.5 7.1e-51 198.7
Csa05g03065 . 294 470 Trihelix Transcription Factor Family AT1G23540 57.5 7.1e-51 198.7
Csa06g02950 . 164 354 Trihelix Transcription Factor Family AT1G23540 51.0 7.1e-51 198.7
Csa01g02931 . 625 818 Trihelix Transcription Factor Family AT1G23540 52.3 1.2e-50 198.0
Csa03g00872 . 135 325 Trihelix Transcription Factor Family AT1G23540 50.5 1.2e-50 198.0
Csa06g00019 . 149 340 Trihelix Transcription Factor Family AT1G23540 52.1 3.5e-50 196.4
Csa01g01919 . 281 458 Trihelix Transcription Factor Family AT1G23540 55.0 6.0e-50 195.7
Csa03g04090 . 385 571 Trihelix Transcription Factor Family AT1G23540 50.8 1.3e-49 194.5
Csa05g02551 . 291 467 Trihelix Transcription Factor Family AT1G23540 54.2 1.8e-49 194.1
Csa03g02648 . 359 538 Trihelix Transcription Factor Family AT1G23540 53.9 2.3e-49 193.7
Csa05g01367 . 269 445 Trihelix Transcription Factor Family AT1G23540 54.2 2.3e-49 193.7
Csa07g02390 . 491 672 Trihelix Transcription Factor Family AT1G23540 52.7 3.0e-49 193.4
Csa01g02911 . 342 527 Trihelix Transcription Factor Family AT1G23540 50.5 5.1e-49 192.6
Csa04g00173 . 28 207 Trihelix Transcription Factor Family AT1G23540 53.3 8.7e-49 191.8
Csa07g01190 . 717 894 Trihelix Transcription Factor Family AT1G23540 52.8 8.7e-49 191.8
Csa04g00762 . 34 213 Trihelix Transcription Factor Family AT1G23540 51.1 1.1e-48 191.4
Csa04g02704 . 55 235 Trihelix Transcription Factor Family AT1G23540 52.7 1.1e-48 191.4
Csa05g01091 . 699 876 Trihelix Transcription Factor Family AT1G23540 51.1 1.6e-47 187.6
Csa06g00289 . 292 472 Trihelix Transcription Factor Family AT1G23540 53.6 1.6e-47 187.6
Csa02g01758 . 286 466 Trihelix Transcription Factor Family AT1G23540 51.4 2.2e-47 187.2
Csa03g04172 . 399 583 Trihelix Transcription Factor Family AT1G23540 51.1 2.2e-47 187.2
Csa04g00130 . 352 539 Trihelix Transcription Factor Family AT1G23540 52.7 4.8e-47 186.0
Csa04g00931 . 278 458 Trihelix Transcription Factor Family AT1G23540 53.6 6.3e-47 185.7
Csa03g01694 . 1018 1193 Trihelix Transcription Factor Family AT1G23540 51.1 1.1e-46 184.9
Csa03g01952 . 772 947 Trihelix Transcription Factor Family AT1G23540 52.8 2.4e-46 183.7
Csa06g02833 . 875 1054 Trihelix Transcription Factor Family AT1G23540 52.2 2.4e-46 183.7
Csa03g03354 . 334 511 Trihelix Transcription Factor Family AT1G23540 50.6 3.1e-46 183.3
Csa07g02075 . 802 977 Trihelix Transcription Factor Family AT1G23540 51.1 3.1e-46 183.3
Csa04g02262 . 646 830 Trihelix Transcription Factor Family AT1G23540 50.3 5.3e-46 182.6
Csa02g01808 . 1 378 Trihelix Transcription Factor Family AT3G25990 66.2 2.3e-141 498.8
Csa02g00136 CCT 65 423 Trihelix Transcription Factor Family AT1G12040 65.1 2.6e-43 174.1
Csa01g02065 CCT 8 218 Trihelix Transcription Factor Family AT1G12040 57.8 5.6e-38 156.4
Csa03g03064 CCT 39 308 Trihelix Transcription Factor Family AT2G38250 58.4 1.5e-58 223.4
Csa05g03083 . 323 759 Trihelix Transcription Factor Family AT5G38560 70.6 7.2e-173 604.4
Csa05g02558 . 279 713 Trihelix Transcription Factor Family AT5G38560 61.7 1.0e-147 520.8
Csa05g02336 . 295 747 Trihelix Transcription Factor Family AT5G38560 56.1 1.0e-139 494.2
Csa01g01727 CCT 221 605 Trihelix Transcription Factor Family AT5G38560 57.4 1.4e-123 440.7
Csa02g00125 CCT 232 626 Trihelix Transcription Factor Family AT5G38560 56.3 2.2e-121 433.3
Csa02g01248 . 296 644 Trihelix Transcription Factor Family AT5G38560 60.5 3.4e-114 409.5
Csa04g00511 . 277 608 Trihelix Transcription Factor Family AT5G38560 61.8 5.8e-114 408.7
Csa04g00130 . 356 671 Trihelix Transcription Factor Family AT5G38560 51.3 1.8e-83 307.4
Csa03g04090 . 392 676 Trihelix Transcription Factor Family AT5G38560 52.9 3.1e-83 306.6
Csa01g02931 . 638 923 Trihelix Transcription Factor Family AT5G38560 54.0 6.4e-81 298.9
Csa07g02390 . 492 788 Trihelix Transcription Factor Family AT5G38560 50.8 1.8e-78 290.8
Csa07g01177 . 181 466 Trihelix Transcription Factor Family AT5G38560 50.2 2.0e-74 277.3
Csa06g01959 . 59 347 Trihelix Transcription Factor Family AT5G38560 50.9 7.6e-74 275.4
Csa02g00125 CCT 250 651 Trihelix Transcription Factor Family AT4G32710 59.0 1.5e-123 440.7
Csa01g01727 CCT 222 617 Trihelix Transcription Factor Family AT4G32710 59.9 2.1e-122 436.8
Csa02g01248 . 299 648 Trihelix Transcription Factor Family AT4G32710 60.7 1.2e-112 404.4
Csa04g00511 . 280 593 Trihelix Transcription Factor Family AT4G32710 63.2 2.4e-110 396.7
Csa05g02336 . 351 735 Trihelix Transcription Factor Family AT4G32710 55.0 3.3e-107 386.3
Csa05g03083 . 430 728 Trihelix Transcription Factor Family AT4G32710 62.3 3.4e-104 376.3
Csa05g02558 . 346 660 Trihelix Transcription Factor Family AT4G32710 60.6 2.4e-102 370.2
Csa04g02704 . 55 341 Trihelix Transcription Factor Family AT4G32710 50.3 5.9e-72 269.2
Csa05g02336 . 298 735 Trihelix Transcription Factor Family AT1G70460 69.8 1.5e-168 590.1
Csa05g03083 . 430 757 Trihelix Transcription Factor Family AT1G70460 71.6 1.5e-136 483.8
Csa02g00125 CCT 282 634 Trihelix Transcription Factor Family AT1G70460 64.3 5.6e-128 455.3
Csa01g01727 CCT 246 606 Trihelix Transcription Factor Family AT1G70460 63.2 9.6e-128 454.5
Csa05g02558 . 365 710 Trihelix Transcription Factor Family AT1G70460 64.6 1.5e-125 447.2
Csa04g00511 . 270 615 Trihelix Transcription Factor Family AT1G70460 64.1 1.2e-122 437.6
Csa02g01248 . 291 628 Trihelix Transcription Factor Family AT1G70460 63.4 4.0e-118 422.5
Csa03g04090 . 385 679 Trihelix Transcription Factor Family AT1G70460 51.5 1.1e-83 308.1
Csa01g02911 . 341 623 Trihelix Transcription Factor Family AT1G70460 50.5 1.3e-79 294.7
Csa01g02931 . 633 923 Trihelix Transcription Factor Family AT1G70460 51.2 5.3e-78 289.3
Csa04g00130 . 352 644 Trihelix Transcription Factor Family AT1G70460 52.4 1.5e-77 287.7
Csa03g02648 . 359 643 Trihelix Transcription Factor Family AT1G70460 52.1 1.0e-76 285.0
Csa07g02390 . 491 777 Trihelix Transcription Factor Family AT1G70460 50.7 1.9e-75 280.8
Csa06g00019 . 151 427 Trihelix Transcription Factor Family AT1G70460 51.6 2.3e-73 273.9
Csa06g00402 . 37 487 Trihelix Transcription Factor Family AT1G76890 50.7 1.1e-81 301.2
Csa06g00073 . 32 425 Trihelix Transcription Factor Family AT2G15880 63.7 4.5e-64 243.0
Csa06g00076 . 26 400 Trihelix Transcription Factor Family AT2G15880 67.4 1.7e-63 241.1
Csa06g00075 . 26 225 Trihelix Transcription Factor Family AT2G15880 63.5 4.1e-49 193.4
Csa06g00077 . 26 225 Trihelix Transcription Factor Family AT2G15880 63.5 4.1e-49 193.4
Csa01g02065 CCT 25 396 Trihelix Transcription Factor Family AT2G15880 68.6 1.4e-41 168.3
Csa02g00136 CCT 47 423 Trihelix Transcription Factor Family AT2G15880 64.8 2.0e-40 164.5
Csa03g03386 . 96 362 Trihelix Transcription Factor Family AT5G03680 59.5 1.3e-77 287.7
       

Syn-Orthogroups


Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003369 5 1 3 6 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 1 2 49
       

Regulatory proteins


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
31338 PF13837 Myb_DNA-bind_4 2.50E-19 CL0123 Csa TF