Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03407 ATGGAAATTTCCTTTCTTCTTCACCCAATTCTTCTCTTTTTCTTTTTTCTTATATTCATCTTTATAATCCTCTTTCTTTTGAGGCCAAAATTTCTATGCAACTGTGAGATTTGCCAAGCTTATTTGGCCTCATCTTGGTCCAAAGACTTCCATAACCTTTGTGATTGGTATTCTCATCTTCTTCGGCAATCTCCGACGAAGACCATTCACATCCACGTTTTAAGGAACACGATCACGGCTAATCCCGACAACGTGGAATACATTCTCAAGACAAAATTTGAAAATTACCCAAAAGGGAAAATCTTCTCCTCGATCCTAGGCGATTTTTTGGGCCGTGGGATTTTCAATGTCGATGGCGATTTGTGGCGGTTTCAGAAGAAAATGGCGATCATCGAGCTTGGTCAACAGTCGATTAGATCCTACTGTTTTGAAATTGTTTCTCAGGAGATTCATTCCCGCCTTTTGCCGCTTCTTTCGTCCGTTGCCGATGGCGGCAGTGGCGGAGTTTTGGATTTACAAGATGTGTTTAGAAGATTTGCTTTTGATAGTATTTGTAAGTTTTCGTTTGGGTTGGATCCAATGTGCTTGGAGCTGTCGCTTCCCATCTCAGATATCGCCGTCGCTTTCGATCTTGCTTCTAAGCTTTCTGCTGAAAGAGCCATGGCAGTCCCGCCGTTGATCTGGAAAATCAAGCGAATGCTCAACTTAGGAAGAGAGAAGGAATTGAAGAAAGCAATAAAGTTAATCAACGTGTTGGCTCATGAAGTAATTCGACAAAGAAGAAAACTAGGATTCTCGACCCATAGGGACCTCCTCTCCCAATTTATGCGAACCGTATCTGATGAGACTTTCTTACGAGACATCATTGTTAGCTTTCTTTTAGCCGGTCGTGATACTATTGCCTCTGCCCTCACTAGCTTCTTTTGGGTCATTTCCACCCATCCTGCCGTAGAGTCTGCTATCCAACTCGAGGCTGATCGAGTCATTGGCCCCACCTCGAACCCTACCTCCTTTGACCAAATACGAAATCTCCACTACTTACAAGCTGCCATCTTCGAGTCCATGAGGTTGTATCCTCCCATTCAGTTTGACTCAAAGTTTTGCCAAAACGATGACATTTTACCCGATGGAACTTTCGTTCGACGTGGGACTCGAGTCAGTTACCATCCTTATGCAATGGGTCGAATGGAGCAAATTTGGGGAACAAACTGCCTGGAGTTCAACCCAGAACGATGGCTAAAAAACAACATATTTTGTCCTGAAAACCCGTTCAAGTATCCCATATTCCAAGGTGGATTTCGGTTTTGTTTAGGCAAAGAAATGGCTCTGTTTGAGTTGAAAATTGTAGCCCTTTCAGTTATTCGTCATTTTCGAATCCAATCTACAACACCGTCGTCGTCTGTGGCACCACGATTCTCCCCTGGCCTCACTGCGACCTTTTGTGGTGGATTCAAAGTTATAGTTAGTAAGAAGAGAAAATGGGAGTGA 1488 43.41 MEISFLLHPILLFFFFLIFIFIILFLLRPKFLCNCEICQAYLASSWSKDFHNLCDWYSHLLRQSPTKTIHIHVLRNTITANPDNVEYILKTKFENYPKGKIFSSILGDFLGRGIFNVDGDLWRFQKKMAIIELGQQSIRSYCFEIVSQEIHSRLLPLLSSVADGGSGGVLDLQDVFRRFAFDSICKFSFGLDPMCLELSLPISDIAVAFDLASKLSAERAMAVPPLIWKIKRMLNLGREKELKKAIKLINVLAHEVIRQRRKLGFSTHRDLLSQFMRTVSDETFLRDIIVSFLLAGRDTIASALTSFFWVISTHPAVESAIQLEADRVIGPTSNPTSFDQIRNLHYLQAAIFESMRLYPPIQFDSKFCQNDDILPDGTFVRRGTRVSYHPYAMGRMEQIWGTNCLEFNPERWLKNNIFCPENPFKYPIFQGGFRFCLGKEMALFELKIVALSVIRHFRIQSTTPSSSVAPRFSPGLTATFCGGFKVIVSKKRKWE* 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30730099 30732396 - CsaV3_3G037130.1 Csa03g03407 524312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03407 495 PANTHER CYTOCHROME P450 14 485 - -
Csa03g03407 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 14 485 - -
Csa03g03407 495 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 Gene3D Cytochrome P450 41 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 SUPERFAMILY Cytochrome P450 51 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03407 495 Pfam Cytochrome P450 67 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01460 Csa-Chr1:10240997 Csa03g03407 Csa-Chr3:30730099 0 dispersed
Csa03g03407 Csa-Chr3:30730099 Csa03g03688 Csa-Chr3:32808195 2.09E-130 dispersed
Csa03g03407 Csa-Chr3:30730099 Csa01g00063 Csa-Chr1:362093 9.49E-138 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03407 K20624 - csv:101207686 962.214