Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03577 ATGGAAATCGACTCACTGACGAATGTCCACCGCAAGCAGTGTACCTATGAATTATCGGATGAGCAGTACAAGATTCAGAAGGAGACATACAAGGGCCAGCAATACAGTCACATTTACTTTGCTAGACTTCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAACTGGAAACCTCATTTACCTGTTAGCACCGTATTGGGGTTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGTCTACAAGCACATGAAACTTAAACCTACCATTTTGGACGAGTATTCAAAGGAGAGATCTGCCATCCCACTTGTTAAGCCACACAACTTTATGCATCCAGATGATCATCTTGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTGTATGTTACAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTCCGTTGGTGACTTTTTGGTTTTGGATATCCTAGAAGCTGACTTGCCACCTCAGATAGAGCGGCCACTCATATCAAGTGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTCACGTTGTCATTTGTGGGAACTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACAAAGCTGACAGAACCGCTTAAAGAGCTCGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGATCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTTAGATCTTGCACTAATCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGTCAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGACATCTAGCACCAACTGCTCCAAATACTCTTGGTTGTTACCCATTCACTGACCGAGATCCTTTCCTGATCGAGAGCTGTCCTCATGTTTATTTTATTGGGAATCAGGAAAAATTTGATACTCGTTTAATGAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCGATTCCAAGATTTTGTGAGACGGGGATTGCTGTAATGCTCAACTTGAGAAACCTTGAATGCCACACTCTGAGTCTTGGGACTGAATTCAGCTGA 1317 42.9 MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPHLPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLEDESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVMLNLRNLECHTLSLGTEFS* 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31933757 31940699 - CsaV3_3G038830.1 Csa03g03577 524482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03577 438 Gene3D - 169 437 - -
Csa03g03577 438 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 9 433 IPR024826 -
Csa03g03577 438 CDD MPP_PolD2_C 181 433 IPR041863 -
Csa03g03577 438 Gene3D - 40 166 - -
Csa03g03577 438 Pfam DNA polymerase alpha/epsilon subunit B 182 393 IPR007185 GO:0003677|GO:0006260
Csa03g03577 438 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03577 K02328 - csv:101221438 891.723