Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03600 ATGAAGGCCATGACCACCATCTTTGACAACACCACCTCTCCCTCACAATTTTGGTCCTTCTGCTTCATCACTATCCTTCTCTTCCATCTCTTACTCAGAAAACTTCTAACAAAATCTAGACCCTCATCTCCGGACACGCCCAAGCCGCCCCCGAGCCCCTCGGCGCTTCCTTTCATCGGTCACCTCCACCTTCTCACTCCTGTTTTAGTCACCTCCTTCCAAACCTTAGCTCGTCGTTATGGCCCCCTCATCGAGGTTCGACTCGGCGCGTCGAAGTGCATCGTTGTCTCAACCGCAACAGTTGCCAAAGAGATTTTAAAGACTCACGAGGGCAATTTCCTTTCCCGACCGGAGTTTGGTGCCTCCGAGTACTTCATTTACCGAGGGTCGAGGTTCGTCATGGCCCAATATGGACCCTATTGGCGATTCATGAAGAAGTTAACCATGACACGACTTCTGTCACCACCACAGCTAGCGGTCTCCACAGCCATTCGGAGTGAGGAGATTGCGAAACTTGTGGAGAGAATAGAAGCAAGTTCAAGGGAAGAGAAGCCCTTAGATTTGAGATTGGAGTTTACTACTTTGACAAACAATATTATATCAAGGATGGTTTTGAGCACAAGGTGTTGTGGAGGGAAAGATGAGGCTAAAGAGATTAAGGATTTGGCTTGGAGGATTAATATGTTGGCTGGGAAATTGAGTTTGGGGGACATTTTGGGAGCTTTGAAAGTGTTTGATTTCTCTGGAAATGGGAAGAAGTTTGTGAAAACTTTGAAGAAGTTTGATGAGTTGATAGAGAGGATAATGAAAGAGCATGAAGCTGCCATTAATGATGGTGAGGATGAAGAAAGAAAAAAAGACTTGTTGGATATCTTGTTGGAGATTTACAACGATCCAAATGCTGATTTCAAGCTAACCCGAAACGATATCAAGTCGTTCTTGCTTGACCTTTTCATGGCAGGCACCGACACAACGGCGACGGCAATGCTGTGGGCAATGGGAGAGCTCCTAAATTGTCCAGAATCATTCCATCAGCTAAGAAATGAGATAACATCAGTAGTTGGAAACAAGAAGCCAGTCCAAGAATCCGACCTCCCCAACCTCCCCTATCTCCAAGCAGTCGTTAAGGAAACGCTCCGTCTCCACCCCTCGGCGCCGATCATCATCAGGGAATGTCTAGATGACTGCAACATCAACGACTCACTAATCAAAGCCAAAACTCGAGTCTTGATCAATGCATACGCGGTCATGAGAGACCCCGAGTCGTGGTCGGAACCGGACAAGTTCTTGCCGGAGAGGTTTTTGGAAGGGTCCCATGAGAATATTGGGAGCCACAAAATGGAGATGAAAGGGCAAAACTTCCGGTACATTCCGTTTGGGAGTGGGAAGAGAGGCTGCCCTGGAGCTTCCCTTGCTTTGCTGGTTTTTCCATGTGCAATTGCCACTATGGTGCAACGGTTTGATTGGAAGATTGATGGGGATAACGAAGGCAACGTTGATTTGACGGTGGGGTCAGGATTTGCTGCAGAGATGGCAACACCGCTCATATGCTATGCAAACCCTATTATGGGATTCAAATAG 1581 47.25 MKAMTTIFDNTTSPSQFWSFCFITILLFHLLLRKLLTKSRPSSPDTPKPPPSPSALPFIGHLHLLTPVLVTSFQTLARRYGPLIEVRLGASKCIVVSTATVAKEILKTHEGNFLSRPEFGASEYFIYRGSRFVMAQYGPYWRFMKKLTMTRLLSPPQLAVSTAIRSEEIAKLVERIEASSREEKPLDLRLEFTTLTNNIISRMVLSTRCCGGKDEAKEIKDLAWRINMLAGKLSLGDILGALKVFDFSGNGKKFVKTLKKFDELIERIMKEHEAAINDGEDEERKKDLLDILLEIYNDPNADFKLTRNDIKSFLLDLFMAGTDTTATAMLWAMGELLNCPESFHQLRNEITSVVGNKKPVQESDLPNLPYLQAVVKETLRLHPSAPIIIRECLDDCNINDSLIKAKTRVLINAYAVMRDPESWSEPDKFLPERFLEGSHENIGSHKMEMKGQNFRYIPFGSGKRGCPGASLALLVFPCAIATMVQRFDWKIDGDNEGNVDLTVGSGFAAEMATPLICYANPIMGFK* 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32100698 32102690 + CsaV3_3G039060.1 Csa03g03600 524505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03600 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Csa03g03600 526 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 523 - -
Csa03g03600 526 Pfam Cytochrome P450 50 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 Gene3D Cytochrome P450 41 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 SUPERFAMILY Cytochrome P450 47 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03600 526 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 7 523 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03600 Csa-Chr3:32100698 Csa04g01055 Csa-Chr4:8435443 1.06E-128 dispersed
Csa03g03600 Csa-Chr3:32100698 Csa03g03601 Csa-Chr3:32104150 1.16E-126 tandem
Csa03g03600 Csa-Chr3:32100698 Csa07g02040 Csa-Chr7:19786978 8.42E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03600 - - csv:101205168 1008.82