Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g03600 | ATGAAGGCCATGACCACCATCTTTGACAACACCACCTCTCCCTCACAATTTTGGTCCTTCTGCTTCATCACTATCCTTCTCTTCCATCTCTTACTCAGAAAACTTCTAACAAAATCTAGACCCTCATCTCCGGACACGCCCAAGCCGCCCCCGAGCCCCTCGGCGCTTCCTTTCATCGGTCACCTCCACCTTCTCACTCCTGTTTTAGTCACCTCCTTCCAAACCTTAGCTCGTCGTTATGGCCCCCTCATCGAGGTTCGACTCGGCGCGTCGAAGTGCATCGTTGTCTCAACCGCAACAGTTGCCAAAGAGATTTTAAAGACTCACGAGGGCAATTTCCTTTCCCGACCGGAGTTTGGTGCCTCCGAGTACTTCATTTACCGAGGGTCGAGGTTCGTCATGGCCCAATATGGACCCTATTGGCGATTCATGAAGAAGTTAACCATGACACGACTTCTGTCACCACCACAGCTAGCGGTCTCCACAGCCATTCGGAGTGAGGAGATTGCGAAACTTGTGGAGAGAATAGAAGCAAGTTCAAGGGAAGAGAAGCCCTTAGATTTGAGATTGGAGTTTACTACTTTGACAAACAATATTATATCAAGGATGGTTTTGAGCACAAGGTGTTGTGGAGGGAAAGATGAGGCTAAAGAGATTAAGGATTTGGCTTGGAGGATTAATATGTTGGCTGGGAAATTGAGTTTGGGGGACATTTTGGGAGCTTTGAAAGTGTTTGATTTCTCTGGAAATGGGAAGAAGTTTGTGAAAACTTTGAAGAAGTTTGATGAGTTGATAGAGAGGATAATGAAAGAGCATGAAGCTGCCATTAATGATGGTGAGGATGAAGAAAGAAAAAAAGACTTGTTGGATATCTTGTTGGAGATTTACAACGATCCAAATGCTGATTTCAAGCTAACCCGAAACGATATCAAGTCGTTCTTGCTTGACCTTTTCATGGCAGGCACCGACACAACGGCGACGGCAATGCTGTGGGCAATGGGAGAGCTCCTAAATTGTCCAGAATCATTCCATCAGCTAAGAAATGAGATAACATCAGTAGTTGGAAACAAGAAGCCAGTCCAAGAATCCGACCTCCCCAACCTCCCCTATCTCCAAGCAGTCGTTAAGGAAACGCTCCGTCTCCACCCCTCGGCGCCGATCATCATCAGGGAATGTCTAGATGACTGCAACATCAACGACTCACTAATCAAAGCCAAAACTCGAGTCTTGATCAATGCATACGCGGTCATGAGAGACCCCGAGTCGTGGTCGGAACCGGACAAGTTCTTGCCGGAGAGGTTTTTGGAAGGGTCCCATGAGAATATTGGGAGCCACAAAATGGAGATGAAAGGGCAAAACTTCCGGTACATTCCGTTTGGGAGTGGGAAGAGAGGCTGCCCTGGAGCTTCCCTTGCTTTGCTGGTTTTTCCATGTGCAATTGCCACTATGGTGCAACGGTTTGATTGGAAGATTGATGGGGATAACGAAGGCAACGTTGATTTGACGGTGGGGTCAGGATTTGCTGCAGAGATGGCAACACCGCTCATATGCTATGCAAACCCTATTATGGGATTCAAATAG | 1581 | 47.25 | MKAMTTIFDNTTSPSQFWSFCFITILLFHLLLRKLLTKSRPSSPDTPKPPPSPSALPFIGHLHLLTPVLVTSFQTLARRYGPLIEVRLGASKCIVVSTATVAKEILKTHEGNFLSRPEFGASEYFIYRGSRFVMAQYGPYWRFMKKLTMTRLLSPPQLAVSTAIRSEEIAKLVERIEASSREEKPLDLRLEFTTLTNNIISRMVLSTRCCGGKDEAKEIKDLAWRINMLAGKLSLGDILGALKVFDFSGNGKKFVKTLKKFDELIERIMKEHEAAINDGEDEERKKDLLDILLEIYNDPNADFKLTRNDIKSFLLDLFMAGTDTTATAMLWAMGELLNCPESFHQLRNEITSVVGNKKPVQESDLPNLPYLQAVVKETLRLHPSAPIIIRECLDDCNINDSLIKAKTRVLINAYAVMRDPESWSEPDKFLPERFLEGSHENIGSHKMEMKGQNFRYIPFGSGKRGCPGASLALLVFPCAIATMVQRFDWKIDGDNEGNVDLTVGSGFAAEMATPLICYANPIMGFK* | 527 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 32100698 | 32102690 | + | CsaV3_3G039060.1 | Csa03g03600 | 524505 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g03600 | 526 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506|GO:0016705 | |
Csa03g03600 | 526 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 7 | 523 | - | - | |
Csa03g03600 | 526 | Pfam | Cytochrome P450 | 50 | 496 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | E-class P450 group I signature | 101 | 122 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | E-class P450 group I signature | 372 | 390 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | E-class P450 group I signature | 412 | 436 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | Gene3D | Cytochrome P450 | 41 | 513 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | SUPERFAMILY | Cytochrome P450 | 47 | 518 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03600 | 526 | PANTHER | CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 | 7 | 523 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g03600 | Csa-Chr3:32100698 | Csa04g01055 | Csa-Chr4:8435443 | 1.06E-128 | dispersed | |
Csa03g03600 | Csa-Chr3:32100698 | Csa03g03601 | Csa-Chr3:32104150 | 1.16E-126 | tandem | |
Csa03g03600 | Csa-Chr3:32100698 | Csa07g02040 | Csa-Chr7:19786978 | 8.42E-150 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g03600 | - | - | csv:101205168 | 1008.82 |