Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03601 ATGGCTGATTTTTCAGACTACTTTCTTCTTCTCTCTCTCTTGTTAACCTCCTTCCTCTTCGTTCAACTTCTCTTCACTTGGCTCCGCCCTGACAAGCTTCGTCGTCCACCGAGCCCACCCTCCTTGCCAGTCATCGGCCACCTCCACCACCTTGGTCGAATCCCTCACCAAGCTCTTTACAAATTGTCATGTCAATATGGACCATTAATACATCTCTTCTTTGGCTCTAACCCTTGTGTTATTGTCTCTAATTCAGAAATGGCTAAACAATTCCTCAAAACTAATGAATCCTCCTTTTTGAACCGACCCATTAGACTCAACATAAACTATCTCACCTACGGCTCTAAGGACTTCACTTTTGCACCCTATGGACCCTATTGGAAGTTCTTGAAAAAATTGTGCATGACGGAGCTCCTCAGTAGTCGGACTCTCGATCTTTACAGTCCGATAAGGGATGAGGAAATGAGGTTGTTTGTGCAAAGGATTCATGAGCAAGCTATCGTAGGAGCCACGGTTGACGTTGGAGCTGAGCTTTCAAGGTTGATGAACAACGTAATATCGAGGATGGCATTGAGGAGAAGATGCTCGGAGGAGGACAATGGATCAGAAGAGGTCGGGAAGCTAGTGGGGGAGATGTGCGAGCTGGCCGGAGCACTTAACGTTGCGGATATGATTTGGTTTTGCAAGAGATTGGATCTGCAAGGATTTGGAAGCAGAGTAAGAAATGTGAGAAAGAGGTATGATATAATGATGGAGAAGATAATAAATGAGCATGAAGAGGAGAGGAAGAGAAAAAGGGAGGATGGTGAAGATGATGGAGTTAAGGATTTGCTTGACATTTTACTTGACATTTATGAAGATCAAACCTCAGAAATCAAACTCACAAGAGACAATATTAAGGCTTTTGTTATGAACATATTCGGCGCCGGAACTGAAACATCAGCAGCGGCCACAGAGTGGGCATTAGCAGAGCTAATCAACAACCCATCCGCCATGGCCAAAGCAACTCAAGAACTCCACTCCGTCACTGGAAATACCCGCCTCCTTCTCGAATCCGATCTCTTCAAACTCCCCTATCTTCAAGCCGTCGTCAAAGAAACCCTACGCCTCCACCCAACCGCGCCGCTCATCGTCCGGGAGGCGACCGAGTCATGCGCCGTCGCCGGCTACCACATTCCAGCCAAGACCCGCCTGCTTGTCAACGTTTGGGCCATAGCCCGCGATCCGGCCCGTTGGCCTGAACCGACCCAGTTCGAACCCGAACGGTTCCTGAACCGCCCGTCCGGTTCTGACCTACAAAGCTTTGATCTTATGCCATTTGGGAGTGGGCGCCGGAGCTGCCCTGGAGCCGCCATGGCTCTGATTGCGGTGCCGATGGTTCTCGGGAGGTTGATTCAGTGCTTTGAGTGGAGGGTTGATGGCGGCGGCGGCGTTGATATGGAAGAAGGGCCTGGAATTTCTCTCCGACGAGCTCATCCTTTGATTCTAATCCCTGTGCCTAAGCTTCCTCTTCTTCCTTCCATATAA 1527 49.18 MADFSDYFLLLSLLLTSFLFVQLLFTWLRPDKLRRPPSPPSLPVIGHLHHLGRIPHQALYKLSCQYGPLIHLFFGSNPCVIVSNSEMAKQFLKTNESSFLNRPIRLNINYLTYGSKDFTFAPYGPYWKFLKKLCMTELLSSRTLDLYSPIRDEEMRLFVQRIHEQAIVGATVDVGAELSRLMNNVISRMALRRRCSEEDNGSEEVGKLVGEMCELAGALNVADMIWFCKRLDLQGFGSRVRNVRKRYDIMMEKIINEHEEERKRKREDGEDDGVKDLLDILLDIYEDQTSEIKLTRDNIKAFVMNIFGAGTETSAAATEWALAELINNPSAMAKATQELHSVTGNTRLLLESDLFKLPYLQAVVKETLRLHPTAPLIVREATESCAVAGYHIPAKTRLLVNVWAIARDPARWPEPTQFEPERFLNRPSGSDLQSFDLMPFGSGRRSCPGAAMALIAVPMVLGRLIQCFEWRVDGGGGVDMEEGPGISLRRAHPLILIPVPKLPLLPSI* 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32104150 32106655 + CsaV3_3G039070.1 Csa03g03601 524506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03601 508 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 Pfam Cytochrome P450 36 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 501 - -
Csa03g03601 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Csa03g03601 508 SUPERFAMILY Cytochrome P450 36 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 Gene3D Cytochrome P450 28 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PANTHER CYTOCHROME P450 5 501 - -
Csa03g03601 508 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03601 508 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03601 Csa-Chr3:32104150 Csa04g01055 Csa-Chr4:8435443 0 dispersed
Csa03g03600 Csa-Chr3:32100698 Csa03g03601 Csa-Chr3:32104150 1.16E-126 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03601 K24188 - csv:101205411 889.412