Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03688 ATGGATATCTCTGTTCTAACACTAACTCCCTTCATTTTCCTCACTTTTTTCTCTTTTTCCATTTACTTTCTCTTCTTCCCTTCTACAAAATCAAAATCCAAACCCCAACAAGGCTTCAAACACTACCCCTTTGTTGGAACCTTGCCCTTATTCTTACTGAATCGCCACCGTTTTCTCGACTGGTCAACAGAGGTTTTGAGAAACTGCCGAACGAACACCTCGGTGTTCAAACGGCCAGGAAAAGTCCACGGCGTAATCACTGCAAACCCACTTGTTGTTGAGCATATACTAAAGACCCAATTTGAGAATTACCCAAAAGGAGAAAGATTCATTTCACTTTTGGAAGATTTCTTGGGCAGAGGAATTTTTAACTCGGACGGAGAAATTTGGAAAGTACAGAGGAAGACGGCGAGTTATGAATTCAATACGAAATCGTTGCGAAATTTTGTTATGGAGAATGTTCGAGTTGAGATTCAGAGTAGGTTGTTGCCTATTTTTGGAAAAGCTTGTGAAACGGAACGGATTTTGGATCTACAGGATGTTTTGGAACGGTTTGCGTTTGACAATGTTTGTAAATTGGCTTTTAATTATGACCCTGCTTGTCTCGGCGGCGGTGGCACTTCCGCCGCTGAGTTTATGCGTGCTTTTGAGGACGCCGCCAATCTCAGCGCCGGCAGATTCATGTATGCTTTCCCAGGTTTGTACAAAGTGAAGAAATTTTTTAACATAGGATCAGAAAAAACCCTAAATGAATCAATAGCTATAGTTCACAAATTTGCTGAAGACATCATCCACTCAAGATTAGAAGAAAAGAAAACAACCCAAATAGAAAACGATCAAGATTTATTATCTCGGTTCATGGGCGACCAAAACAATTCTCCACAATTCCTTCGAGACATAATCATAAGCTTCATCCTCGCCGGTCGAGATACCACTTCATCAGCTCTAACATGGTTCTTCTGGATCTTATCCTCTCGACACGATGTCCAACAAAAAATCCTCGCAGAACTCGAAACAATCCGAACAAAAGCACGTAAGGAAATTGGAGAAATGTATAGCTTCGACGAACTGCGTGACATGCACTATCTACAAGCAGCTATATCAGAGACTCTCCGTCTATACCCACCGGTGCCAGTCGATACAAAAGCATGTCGAAACGACGACGTGCTACCCGATGGGACGTTTATTGGGAAGAGTTGGTTTGTGACGTACCATACGTATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGGATTATGGAGAATATTCGCCAGAGAGGTGGTTGGAGAATGGGGTTTGTAAGACGGAGAGTCCGTTTCGGTTCCCGATATTCCATGCGGGGCCGAGGATGTGTTTGGGGAAGGACATGGCTTATATTCAGATGAAGTGCATAGCTGCAGCAGTGATTGAGAAGTTTGAAGTGGAAATGGTGGAGAAGAAGAAGAGTCCAAAGCATTTGTTGTCGTTGACATTGAGGATGGAGAATGGCTTAGAAGTGATGATCAAAAAGAGAGAGAGGGGTTTGTCCATCTGA 1536 43.1 MDISVLTLTPFIFLTFFSFSIYFLFFPSTKSKSKPQQGFKHYPFVGTLPLFLLNRHRFLDWSTEVLRNCRTNTSVFKRPGKVHGVITANPLVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVRVEIQSRLLPIFGKACETERILDLQDVLERFAFDNVCKLAFNYDPACLGGGGTSAAEFMRAFEDAANLSAGRFMYAFPGLYKVKKFFNIGSEKTLNESIAIVHKFAEDIIHSRLEEKKTTQIENDQDLLSRFMGDQNNSPQFLRDIIISFILAGRDTTSSALTWFFWILSSRHDVQQKILAELETIRTKARKEIGEMYSFDELRDMHYLQAAISETLRLYPPVPVDTKACRNDDVLPDGTFIGKSWFVTYHTYAMGRMESIWGKDYGEYSPERWLENGVCKTESPFRFPIFHAGPRMCLGKDMAYIQMKCIAAAVIEKFEVEMVEKKKSPKHLLSLTLRMENGLEVMIKKRERGLSI* 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32808195 32810174 - CsaV3_3G039940.1 Csa03g03688 524593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03688 511 PANTHER CYTOCHROME P450 94B3-LIKE 27 503 - -
Csa03g03688 511 SUPERFAMILY Cytochrome P450 33 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 Gene3D Cytochrome P450 23 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 Pfam Cytochrome P450 78 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03688 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Csa03g03688 511 PANTHER CYTOCHROME P450 27 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00948 Csa-Chr3:7723773 Csa03g03688 Csa-Chr3:32808195 2.54E-99 dispersed
Csa03g03407 Csa-Chr3:30730099 Csa03g03688 Csa-Chr3:32808195 2.09E-130 dispersed
Csa03g03688 Csa-Chr3:32808195 Csa07g01066 Csa-Chr7:10198721 4.21E-147 dispersed
Csa03g03688 Csa-Chr3:32808195 Csa01g00063 Csa-Chr1:362093 9.66E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03688 - - csv:101211731 1000.35