Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03691 ATGGGATTATTCTTTGGCCATTTCTTCCAAAATGCAATGCCATACATCGCAGTCATCTTCCTCCAATTCGGCTACGCCGGACTGAACATCCTCTCTGCCATCGCCCTCAATGGTGGTATCAGTCACTACGTTCTTGTCGTCTACCGTCACGTCTTTGCCACTGCGATCATGGTGCCCTTTGCTCTCATTCTGGAGAGGAAATTTAGACCAAAGATTACAGTTAAGATTTTCATTCAGATGTTCGTTCTTGCTCTTCTTGGGCCATTGCTTGATCAAAACTTATACTACATGGGGCTAAAATTGACATCTCCAACAATCGCTTGCGCCATAGGCAACATGCTTCCTTCAATGACATTTGCTATGGCAGTCATTTGCAAGATAGAAAAGTTGGACTTGAAAAGAGTGAGATGTCGAGCGAAGTTGTTGGGAACAATAGTGACCTTAGGTGGAGCCATGTTGATGACATTTTATAAAGGAAGTGTTGTCAACTTTCTCGGCACAAAGCACGGCCCCCAACCGAACATACCGTCCACGGCCGTGCTCAAGCACCACAACAAGGGAGAGTACATCAAAGGATCCATTTTGCTCATCATCTCCAATTTGGCTTGGGCGGCCTTCTTCGTCCTCCAAGCAATAACATTGAGAAAATACACTGCCCATCTTTCTCTCACCGCCTTGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGCCACCCTTGCCATGGAGCGTCGCCTCTCCGTGTGGACCATCGGTTGGGATTGGAACCTTCTAGCATCCGCTTATGCGGGAATTGTGACGACAGGGGTGGCATATTATGTTCAAGGTTTGGTTATGAAAAGAAGAGGGCCAGTTTTTGTTACAGCTTTTGGTCCTATGGTAGTAGTGATTGTTGCGTTCATGGGTCATTTCATCTTGGCCGAAGAGATTTATGTTGGAGGGATAATTGGAACAGTGGTGATTGTGATAGGGTTATACTTTGTTTTGTGGGGAATGTATAAGGAAAGCAAAGAGAAGAAGGAAGAAGTTAATGGAGAGATTATTGTTGAAGCAATAATAGGGGAAGGTATTGAATTAGCAATTGATCAAAAGAAAGAGGAGGGTTTGACCATTACTACTATTCCATCCATGGCTTCACCTAATTACATGGAAAAAGAACACTAA 1164 44.33 MGLFFGHFFQNAMPYIAVIFLQFGYAGLNILSAIALNGGISHYVLVVYRHVFATAIMVPFALILERKFRPKITVKIFIQMFVLALLGPLLDQNLYYMGLKLTSPTIACAIGNMLPSMTFAMAVICKIEKLDLKRVRCRAKLLGTIVTLGGAMLMTFYKGSVVNFLGTKHGPQPNIPSTAVLKHHNKGEYIKGSILLIISNLAWAAFFVLQAITLRKYTAHLSLTALVCFLGTLQAIVATLAMERRLSVWTIGWDWNLLASAYAGIVTTGVAYYVQGLVMKRRGPVFVTAFGPMVVVIVAFMGHFILAEEIYVGGIIGTVVIVIGLYFVLWGMYKESKEKKEEVNGEIIVEAIIGEGIELAIDQKKEEGLTITTIPSMASPNYMEKEH* 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32842765 32844939 + CsaV3_3G039970.1 Csa03g03691 524596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03691 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Csa03g03691 387 Pfam EamA-like transporter family 14 155 IPR000620 GO:0016020|GO:0016021
Csa03g03691 387 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Csa03g03691 387 PANTHER WAT1-RELATED PROTEIN 9 363 IPR030184 GO:0016021|GO:0022857
Csa03g03691 387 PANTHER WAT1-RELATED PROTEIN 9 363 - -
Csa03g03691 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 331 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g03691 Csa04g01903 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03689 Csa-Chr3:32827816 Csa03g03691 Csa-Chr3:32842765 0 dispersed
Csa03g03691 Csa-Chr3:32842765 Csa04g01903 Csa-Chr4:18776633 2.37E-142 dispersed
Csa03g03690 Csa-Chr3:32832894 Csa03g03691 Csa-Chr3:32842765 1.03E-154 tandem
Csa03g03691 Csa-Chr3:32842765 Csa03g03692 Csa-Chr3:32850918 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03691 - - csv:101212451 722.235