Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03693 ATGACTCCACCAACTCCCTTCCCTCGTAAGATCATATATCAATCTCATCTCCTCAACTTCAACAATTCCTCAAAATTAAAACCCCCACAAAACCAAAAATTAATATCAAAAGGAAAAAAAATGCTTCTCTCTCTCCTCCCTCTCTCTTTTCTCCTCCTCCTCCTCCTCTACAAAATCTACAACCGTCTCCGCTTCAACCTTCCTCCAGGGCCACGCCCGCTTCCGGTCGTCGGTAACCTATACGACGTCAAACCCGTCCGGTTCAGATGCTACACCGATTGGGCCAAGCAGTACGGTCCCATCATATCGGTGTGGTTCGGGTCCACGTTGAACGTGGTTGTGTCCAACACCGAGTTAGCCAGGGAGGTTCTGAAGGAGCACGACCAGAGCCTGGCCGACCGCCACCGGAGCAGATCGGCCGCGAAATTTAGCCGGGACGGGAAGGATTTGATTTGGGCGGATTATGGACCGCATTACGTGAAGGTTAGGAAAGTTTGTACCATCGAACTCTTCTCTCCGAAACGACTTGAATCGTTGAGGCCGATTAGAGAAGATGAAGTTTCCGCCATGGTTGAAGATGTTTTCAACAACTGCACTAATCCTGAGAAGTATGGAAAGAGTTTGAGGCTTCGGGAATTTCTGGGAGCAGTTTCGTTCAACAACATCACAAGGCTTGCTTTTGGGAAGAGATTTGTGAATTCCGATGGCGTTTTGGACGAACAGGGCTTGGAATTCAAGGCTATTGTCGCCAATGGCCTCAAGCTCGGCGCCTCCCTTGCCATGGCTGAGCACATTCCTTGGCTCCGTTGGATGTTCCCTCTCGAAGAAGAAGCTTTCGCCAAGCATGGCGCCCGTCGCGACCGTCTCACTCGAGCTATCATGGATGAGCATACCACAGCTCGTACTTTGAGCGGCAATGTCCAGAATCACTTCGTTGATGCTCTCCTCACTCTTAAAGACAAGTACGATCTCAGCGAAGATACTATCATTGGCCTCCTTTGGGATATGATCACAGCCGGCATGGACACGACAGCGATTTCAGTGGAATGGGCAATGGCGGAGATCGTAAGAAGCCCTAGAGTTCAGAAGAAAGTTCAGGAAGAACTAGACAAAGTGATTGGAGTAAAACGAATCATGACAGAGAACGATTTCTCAAATCTTCCATATCTCCAATGCGTCGTAAAAGAGGCAATGAGATTACATCCACCGACGCCATTGATGCTGCCACACCGATCCAACGCCAACGTCAAGATCGGCGGATACGACATCCCCAAAGGCTCAAACGTGCACGTGAACGTCTGGGCAGTAGCACGTGACCCAGCAGTATGGAAGAACCCGGAGGAATTCCGGCCGGAGCGATTCCTAGAAGAGGATATTGACATGAAAGGACACGATCTCCGACTGCTGCCGTTCGGAGCAGGGCGGAGGGTTTGTCCAGGGGCTCAATTGGGGATCAATTTGGTGACATCGATGTTGGGGCATCTACTTCATCACTTTGAATGGACGGTGGGGCCGGAGAAGAAGAAGGAGGAGATAGACATGTCAGAGAGCCCTGGATTGGTGTCATACATGAAGACGCCGTTGGAGGCTGTGGCGACTCCAAGGCTGAATTCGAAATTGTTGTACAAACGAGTGGCTGTGGACATGTAA 1650 50.3 MTPPTPFPRKIIYQSHLLNFNNSSKLKPPQNQKLISKGKKMLLSLLPLSFLLLLLLYKIYNRLRFNLPPGPRPLPVVGNLYDVKPVRFRCYTDWAKQYGPIISVWFGSTLNVVVSNTELAREVLKEHDQSLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEDVFNNCTNPEKYGKSLRLREFLGAVSFNNITRLAFGKRFVNSDGVLDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMDEHTTARTLSGNVQNHFVDALLTLKDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRSPRVQKKVQEELDKVIGVKRIMTENDFSNLPYLQCVVKEAMRLHPPTPLMLPHRSNANVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPEEFRPERFLEEDIDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWTVGPEKKKEEIDMSESPGLVSYMKTPLEAVATPRLNSKLLYKRVAVDM* 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32857081 32860306 + CsaV3_3G039990.1 Csa03g03693 524598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03693 549 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Csa03g03693 549 Pfam Cytochrome P450 68 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 119 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 SUPERFAMILY Cytochrome P450 68 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 45 541 - -
Csa03g03693 549 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 Gene3D Cytochrome P450 61 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03693 549 PANTHER CYTOCHROME P450 98A3 45 541 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03693 Csa-Chr3:32857081 Csa03g02763 Csa-Chr3:26495596 3.12E-119 dispersed
Csa04g02367 Csa-Chr4:24040378 Csa03g03693 Csa-Chr3:32857081 2.38E-57 dispersed
Csa03g03693 Csa-Chr3:32857081 Csa01g00894 Csa-Chr1:5553408 7.95E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03693 K09754 - csv:101217257 1036.94