Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03694 ATGGCAATTGACCAGGCCGAGCTTAGCACTGAGCAGGTTCTTAGAAGGGACATTCCATGGGAGACATACATGACTACTAAACTTATCAGTGGAACAAGCCTTCAGTTGTTAAGGCGTTATGATAACAGACCAGAGAGTTACAGGGCGCAGCTGTTGGATGATGATGGTCCAGCATATGTTCGGGTATTCGTTAGCATTTTACGCGATATATTTAAGGAAGAAACAGTGGAATATGTTCTAGCATTAATCGATGAAATGCTTACAGCGAACCCAAAAAGAGCAAGATTGTTCCATGATCCTTCTCTTGCAAGTGAAGATGCTTATGAACCTTTCCTAAGATTGCTTTGGAAAGGAAATTGGTTCATACAGGAGAAGAGCTGTAAAATACTTGCGCTGATAGTGAGTGCTAGACCGAAAACTCATGATGGAAGTTTTGCAAATGATGATTCCTCGAACTCCAAGAACAAAAATACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCTAGTCGTGCTGTACAGACTTCGATCAATTGCCTTGCAACTCTGCTGAAGGAACCAAAGGTCAGATCCTCCTTCGTTCAGACAGATGGAGTGAAATTGCTTATTCCTTTGATTTCTCCTGCATCGACCCAACAATCTATTCAGCTTCTATACGAAACTTGTCTGTGTGTTTGGCTCTTGTCATATTATGAGCCGGCAATTGAATTCTTGGCCACCTCTAGGACCCTTCCAAGACTCATCGATGTTGTCAAGAGTTCTACAAAAGAGAAGGTTGTCCGAGTTATTATTTTGACCTTGAGGAACCTACTCCACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTTGGACTACCACAAGTTGTTCAAAGTTTGAAATCACAAGCATGGAGTGATGAGGACCTTTTGGAGGCTTTGAATCAACTAGAAGAGGGACTGAAAGATAACATCAAGAAACTAAGTTCTTTCGACAAGTATAAGCAAGAAGTCCTCCTCGGGCATCTTGACTGGTCTCCTATGCACAAAGATGTCAATTTCTGGCGAGAAAACATTACAAGCTTTGAAGAGAACGACTTGAAGATATTGAGGGTCCTAATCACAATTCTGGATAGTTCCACTGATCCAAGGGCTTTGGCAGTTGCTTGTTTTGATCTTTCTCAGTTCATTCAACACCATCCAGCTGGGAGAGTTATAGTGACAGATCTCAAGGCCAAAGAAAGAGTGATGAAATTGATGAATCATGAGAATGCTGAGGTTACCAAATATGCCCTCCTTTGCATTCAAAGGCTCTTTCTTGGTGCCAAGTATGCTAGCTTTCTACAGGCTTAA 1365 42.12 MAIDQAELSTEQVLRRDIPWETYMTTKLISGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDPSLASEDAYEPFLRLLWKGNWFIQEKSCKILALIVSARPKTHDGSFANDDSSNSKNKNTTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSINCLATLLKEPKVRSSFVQTDGVKLLIPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVIILTLRNLLHKGTFGAQMVGLGLPQVVQSLKSQAWSDEDLLEALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDLKILRVLITILDSSTDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYALLCIQRLFLGAKYASFLQA* 455
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 32861153 32871463 - CsaV3_3G040000.1 Csa03g03694 524599
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03694 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 3 454 - -
Csa03g03694 454 CDD VATPase_H 4 448 - -
Csa03g03694 454 PIRSF V-ATP_synth_H 2 453 IPR004908 GO:0000221|GO:0046961|GO:1902600
Csa03g03694 454 Pfam V-ATPase subunit H 7 325 IPR004908 GO:0000221|GO:0046961|GO:1902600
Csa03g03694 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 3 454 IPR004908 GO:0000221|GO:0046961|GO:1902600
Csa03g03694 454 SUPERFAMILY ARM repeat 10 444 IPR016024 -
Csa03g03694 454 Gene3D - 345 446 IPR038497 -
Csa03g03694 454 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 400 407 IPR018506 GO:0020037
Csa03g03694 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221|GO:1902600
Csa03g03694 454 Gene3D - 6 333 IPR011989 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03694 K02144 - csv:101217015 892.878