Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03695 ATGGGTTTGGAAATTATGGATCCAAACACCTGCATCAGGGGCTGCTGCTCCACCAATTCGATTCCTCTTCATCTTCAACCTTCCGCTTTCACGCTGCTCTCTCCAATTGCCCGAGGGGGCGAGAGTACTGTGTATGAAGGAAGGTTGGATGGTAGAAAAGTGGCTGTAAAGAAGCCTATATTGTCTACTTCTGAGGAATTGGATAAATTTCATAAGGAGCTCCAGTTGCTATGTGAATTAGATCATCCAGGCATAGTAAAATTGGTTGCAGCAAATGCGAAGCCACCTAACTACATGTTTTTCTTTGAATACTACGAGTCTCCAAATCTTGCGGAGAAATTGCATGTTGAAGAATGGAATCCAAGTATCAATCAGGTGCTTATGATCACCCTAGAGTTAGCAAAGACTTTGCAGTATTTGCATAACTTGGGGATTGTACATAGGGATGTGAAACCAGCAAACGTTCTTCTTGACAAAGATTTGCATCCATACTTGGCTGATTTTGGTTTAGCAATACACCAGAAGTATCTGAAAGAAGTTTCTGCTGAAAATTGGAAGTCATCTGGCAAGCCAACAGGTGGTTTCTATAAGAAAAGCATGGTTGGGACACTCATTTATATGGCACCTGAGATATTGAGGAAGGAAATACATACAGACCTATCAGACGTCTATAGTTTTGGCATCCTAATGAATGAGCTTTTGACTGGTGTTGTTCCATATACTGATCTTCGTACTGAAGCACAGGCCCACACTGTACTGGAAATGAATTATACAGAGCAGCTGCTTACGGCAGCTATTGTTTCAGATGGCTTGCGGCCAGCCCTTCCTAGTGATGAGTCAGGCACACCATCTAGGTTGTTATCACTTATACAGTCGTGCTGGGATGCAAATCCTAAAAACAGACCATCTTTTTCTGATATAGTTATGGACTTGGAGTCAATTTGGGAGAGTAGAAAAAGTTTAGAATCTGTTTCCTCTGGACAACTTGATTTGTGTGGTAGGCTTAGTGATGCTAATGAACATGATTGTGCGTATCGAGAAGAAATTAACTGGTCAAATCAGGGAGAACATTGTTCTCAAAAGTTTTCTGGAGATAGGTGTGGTTTGAATGAATGGCTTGACCACTCAACAGACCAATTGGCATACCGCCCAACACTTTCTTGTGGATCATTCTCCACCCGTGGGATGAGAGAGACCATGGAGGACTCTCATTTCCTTTTGCCTCACTTCTGCAGTGATGAAAACATCCATGCCTTTGGGATCTTTGATGGTCATAGAGGTGCAGCAGCTGCTGAGTTTTCAGCTCAAGCAATTCCTGGATTCTTGCAAAGAGCATTTTCCACGAGAAGTCCTGCAGATGTATTGATGGAAGCATTTGTAAAAACGGACATTGAGTTTAGAAAAGAACTCGAGTTCTTTCGCAAATCCAAGAAACTTAAACAGAAAGACTGGCATCCTGGTTGCACTGCTGTTGTTGCTCTAATTGTTAGAGACAAGCTTTTTGCTGCCAATGCTGGTGATTGCAGGGCAATATTGTGCCGGGCTGGGGATCCCATTGTTTTAAGTAAGGATCATGTTGCTAGTTGTCTTGAGGAGAGAGAGCGTGTCATCAATAATGGAGGGCAGGTCAAGTGGCAAGTTGATACATGGAGGGTTGGTCCGGCTGCTCTTCAGGTAACTCGATCAATTGGCGACGATGATCTGAAGCCAGCTGTGACTGCAGAACCTGAGATAACAGAAACTGTTTTGACATCACAGGATGATTGCCTGGTTATGGCTAGTGATGGATTGTGGGATGTCCTTAGCAACTCTGAGGTAGTTGATATAATAAGGGATACCGTCAAAGATCCAGGAATGTGCTCAAAGCGACTCGCAACAGAAGCGGCAGCTCGGGGCAGCCGCGATAACATCACGGTTATTGTTGTATTTTTACATCCAGTATCTACAATAGAGAGAATTTATTAA 1965 43.21 MGLEIMDPNTCIRGCCSTNSIPLHLQPSAFTLLSPIARGGESTVYEGRLDGRKVAVKKPILSTSEELDKFHKELQLLCELDHPGIVKLVAANAKPPNYMFFFEYYESPNLAEKLHVEEWNPSINQVLMITLELAKTLQYLHNLGIVHRDVKPANVLLDKDLHPYLADFGLAIHQKYLKEVSAENWKSSGKPTGGFYKKSMVGTLIYMAPEILRKEIHTDLSDVYSFGILMNELLTGVVPYTDLRTEAQAHTVLEMNYTEQLLTAAIVSDGLRPALPSDESGTPSRLLSLIQSCWDANPKNRPSFSDIVMDLESIWESRKSLESVSSGQLDLCGRLSDANEHDCAYREEINWSNQGEHCSQKFSGDRCGLNEWLDHSTDQLAYRPTLSCGSFSTRGMRETMEDSHFLLPHFCSDENIHAFGIFDGHRGAAAAEFSAQAIPGFLQRAFSTRSPADVLMEAFVKTDIEFRKELEFFRKSKKLKQKDWHPGCTAVVALIVRDKLFAANAGDCRAILCRAGDPIVLSKDHVASCLEERERVINNGGQVKWQVDTWRVGPAALQVTRSIGDDDLKPAVTAEPEITETVLTSQDDCLVMASDGLWDVLSNSEVVDIIRDTVKDPGMCSKRLATEAAARGSRDNITVIVVFLHPVSTIERIY* 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32869564 32877078 + CsaV3_3G040010.1 Csa03g03695 524600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03695 654 Gene3D - 377 649 IPR036457 -
Csa03g03695 654 Gene3D Transferase(Phosphotransferase) domain 1 16 334 - -
Csa03g03695 654 PANTHER - 1 654 - -
Csa03g03695 654 SMART PP2C_4 377 642 IPR001932 -
Csa03g03695 654 CDD PP2Cc 387 644 IPR001932 -
Csa03g03695 654 Pfam Protein phosphatase 2C 388 637 IPR001932 -
Csa03g03695 654 Pfam Protein kinase domain 32 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g03695 654 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g03695 654 PANTHER PROTEIN PHOSPHATASE 2C 1 654 IPR015655 GO:0004722|GO:0006470
Csa03g03695 654 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g03695 654 ProSiteProfiles PPM-type phosphatase domain profile. 387 644 IPR001932 -
Csa03g03695 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Csa03g03695 654 SMART PP2C_SIG_2 402 644 IPR001932 -
Csa03g03695 654 SUPERFAMILY Protein kinase-like (PK-like) 24 322 IPR011009 -
Csa03g03695 654 SUPERFAMILY PP2C-like 381 646 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03695 Csa-Chr3:32869564 Csa04g02606 Csa-Chr4:25550564 1.24E-47 dispersed
Csa03g03695 Csa-Chr3:32869564 Csa06g03630 Csa-Chr6:29264801 7.61E-40 transposed
Csa03g03695 Csa-Chr3:32869564 Csa01g00844 Csa-Chr1:5290383 5.64E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78064 PF00069 Pkinase 3.10E-47 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03695 - - csv:101217487 1326.23