Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03701 ATGGGAAAGAGTGAAGAAGAACAGCCACTGCCGGTTGGAGGGAGCTCCTCTGAGCTTTCTGACCGGAATGTGGAGAACAGATGCGGCGGCGGTGGGTGCTCTGAGATTCGTAGACTGATTGCGGTGAGATGTGTGTTCTTTCTGTTACTATCAGCGGCTGTGTTTCTCTCTGCTATTTTTTGGCTGCCACCGTTCCTATCCTATGGAAATTGGCCGGATCGGCCAGTTGATTCTGCTTATAGAGATCATGACATAGTAGCGAGTTTTCATGCTTCAAAGCCAGTTCCTTTTCTGCAAAAACATATTTTTGAGCTTGAGGATAACATTTTTGGAGAAATACCCATACCTTCTGTCAAGGTGGCTATCCTCTCACTACAATCATTAGGTGGACCAAATGTAACAAAAATAGTTTTTGCGGTAGATTCTGATGCCAAGTATTCAAAAATTCCCCCAACATCTCAAAGTTTAATCAAGGAAACCTTTGAAACATTGGTTATAAATGAACCTCCTCTCAGACTGAATGAATCTTTATTTGGCAATACATCCTTATTCGAGGTGTTGAAATTTCCTGGAGGAATAACTATTATTCCTCCTCAGAGTGCATTTCTTCTTCAGACGGCGCAGATCTATTTCAATTTTACGTTAAATTATTCTATATATCAAATTCAAGTGAATTTCGATGATCTTTCCAGCCAGCTGAGGTCGGGATTACGTCTATCTCCTTATGAGAATTTATATGTTAGCCTATCGAACGAGAGAGGTTCTACAATTGATGCACCCACTGTTGTACAATCATCTGTCCTGATGGCAATTGGGACTAATTTATCTTCATCGAAACAAAGGCTGAAACAGTTGGCTCATACCATCACAAATTCTCATTCAGGAAACCTTGGCCTGAACAACACCGTATTTGGTAAGGTCAAGCAGGTGCGTCTTTCATTTCTAAACCACTCTCTTGGTGGTGGTGGAAATGCACGGTCGCCTTCACCTGCACCTCTGCCTCATTCCCACCACCACCGTCATCATCACCACCACCATCATCACCATCATCACCACCACCACCACCATCATCACCACCACCACCACCGGGACGCTGCATATTCACCAAGTCCTGGAACAGAGGAGCACAAACATGCACCGAAGAACGGGGTCTCATCTGCTCCCGAAGCTGGTTCTTCCCCAATGGAAGGTCCAACTTCAAGAAAAAGAAACTATGAAGCAACCCCACCTGCTTTTCGTTATGGATATAAAAGGTCGTTAACAAAACTCAGGAAACATAATTTAGGCCCCATTCCTTCTCCAAGCAGTTCTCCGTCGTCGCCATACTTACGAGTAGGCCAGCCAGCACCCGTTTCTGATTCTATTTCTGCATCTAGTCCACTGTCAGGTGTAGTTTTATCTAATGTACAGCCTCCAAATACAGGCAGTGGACATGCAGAAAATTTTGAAAGAAGTTCCCCTTCAGTCTTACCACCACAATTTTCTTCTACTGCAGGTGTTCGTGTTTATACTATTCAATGGACACTTGCGCTATTTCTACTCATATGGCATGTATAA 1557 43.67 MGKSEEEQPLPVGGSSSELSDRNVENRCGGGGCSEIRRLIAVRCVFFLLLSAAVFLSAIFWLPPFLSYGNWPDRPVDSAYRDHDIVASFHASKPVPFLQKHIFELEDNIFGEIPIPSVKVAILSLQSLGGPNVTKIVFAVDSDAKYSKIPPTSQSLIKETFETLVINEPPLRLNESLFGNTSLFEVLKFPGGITIIPPQSAFLLQTAQIYFNFTLNYSIYQIQVNFDDLSSQLRSGLRLSPYENLYVSLSNERGSTIDAPTVVQSSVLMAIGTNLSSSKQRLKQLAHTITNSHSGNLGLNNTVFGKVKQVRLSFLNHSLGGGGNARSPSPAPLPHSHHHRHHHHHHHHHHHHHHHHHHHHHHRDAAYSPSPGTEEHKHAPKNGVSSAPEAGSSPMEGPTSRKRNYEATPPAFRYGYKRSLTKLRKHNLGPIPSPSSSPSSPYLRVGQPAPVSDSISASSPLSGVVLSNVQPPNTGSGHAENFERSSPSVLPPQFSSTAGVRVYTIQWTLALFLLIWHV* 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32895202 32899846 - CsaV3_3G040070.1 Csa03g03701 524606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03701 518 MobiDBLite consensus disorder prediction 471 490 - -
Csa03g03701 518 MobiDBLite consensus disorder prediction 318 412 - -
Csa03g03701 518 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 516 - -
Csa03g03701 518 MobiDBLite consensus disorder prediction 333 364 - -
Csa03g03701 518 MobiDBLite consensus disorder prediction 425 457 - -
Csa03g03701 518 PANTHER F20B24.21 1 516 - -
Csa03g03701 518 MobiDBLite consensus disorder prediction 1 23 - -
Csa03g03701 518 MobiDBLite consensus disorder prediction 365 382 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g03701 Csa04g01897 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01888 Csa-Chr3:14556793 Csa03g03701 Csa-Chr3:32895202 7.96E-56 dispersed
Csa03g03701 Csa-Chr3:32895202 Csa04g01897 Csa-Chr4:18711972 3.54E-122 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03701 - - csv:101213172 948.347