Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g03727 | ATGGTTATGGCTGCCGATTCCCAATTCCATGTTCTTGCCGTTGATGATAGCCTCATAGATAGAAAGCTCATCGAAAGGCTTCTCAAAACCTCCTCATATCAAGTTACTACGGTTGATTCTGGTAGCAAGGCCTTGGAATTTCTTGGTTTGATTCAAGAACATCAACCTACAAACTTCAAATCGTCTTCTAATTCTTCTTTTTCCTCCCCTAATAATCATCATCAGGAAGTGGAAGTGAATCTTATCATCACTGATTACTGTATGCCTGGAATGACTGGCTTCGATTTACTCAAGAAAGTTAAGGAATCAACATCGCTAAGAAACATACCAGTGGTGATAATGTCATCGGAAAACGTACCTTCAAGAATCAACAGATGTTTAGAAGAAGGCGCGGAGGAGTTTTTTCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCATATGATGAAGACGAAAGTGAAGGAAGATCAAAATCGAGAAGAAGGAGAAGAAGAATCAAGAACAGAGACCGAATTGAAGTTGGTACAAGAAGAAGAAGGGGAAATTGAGTTTGAGATGATGAGTAAGAAGAGAAAGGGAGGTACGGAAGAAGAAGAAGAAGAAGGTTTGGAGGAGGAGATGAGAAGAAGAAGAAGAAGATACAACAACAATGGCGTCGCAACGGCGATTTGA | 681 | 40.53 | MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSSPNNHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLCDVNKLKPHMMKTKVKEDQNREEGEEESRTETELKLVQEEEGEIEFEMMSKKRKGGTEEEEEEGLEEEMRRRRRRYNNNGVATAI* | 227 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 33106666 | 33108278 | + | CsaV3_3G040330.1 | Csa03g03727 | 524632 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g03727 | 226 | MobiDBLite | consensus disorder prediction | 153 | 226 | - | - | |
Csa03g03727 | 226 | Pfam | Response regulator receiver domain | 11 | 141 | IPR001789 | GO:0000160 | |
Csa03g03727 | 226 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE | 3 | 217 | - | - | |
Csa03g03727 | 226 | SMART | REC_2 | 9 | 147 | IPR001789 | GO:0000160 | |
Csa03g03727 | 226 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 217 | IPR045279 | GO:0009736 | |
Csa03g03727 | 226 | CDD | REC_typeA_ARR | 11 | 147 | - | - | |
Csa03g03727 | 226 | ProSiteProfiles | Response regulatory domain profile. | 10 | 152 | IPR001789 | GO:0000160 | |
Csa03g03727 | 226 | SUPERFAMILY | CheY-like | 8 | 164 | IPR011006 | - | |
Csa03g03727 | 226 | MobiDBLite | consensus disorder prediction | 153 | 200 | - | - | |
Csa03g03727 | 226 | Gene3D | - | 10 | 224 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Csa03g03727 | Csa04g01951 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g03727 | Csa-Chr3:33106666 | Csa04g01951 | Csa-Chr4:19429525 | 3.57E-80 | dispersed | |
Csa03g03727 | Csa-Chr3:33106666 | Csa05g02375 | Csa-Chr5:25975705 | 2.47E-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
31373 | PF00072 | Response_reg | 4.60E-17 | CL0304 | Csa | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g03727 | K14492 | - | csv:101220810 | 377.481 |