Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g03769 | ATGGAGCAGTATCTTCTGAAAGACTTCGAAGTCGAGCCAAAACGTCCTTCAGAGGCAACCTTGAGGAGATGGCGATCTGCCGTCACAATCGTCAGAAATCGCCGACGGAGGTTCCGAAACACTGCAGATCTCGAGAAACGCTCCGAGGCTGAGAAGAAGAAACTCAAAATCCAGGAAAAAATTCGAGTTGCTCTTTATGTTCACAAGGCAGCATTACAGTTTATCGATGTCGTGAATCGGGATGAGTACCATCTGTCAGATGAGGCTAGGAATGTTGGCTTTAGTATCCATCCAGATGAGCTTGCATCCATTGTCCGTAGCCATGATTACAAGGCATTGAAATTTTATGGTGGTGTGGAAGGACTTTCAAGGAAAGTTTCTGTCTCACTAGATGCAGGTGTCAGTGAAAAGGATACGTCCAAGAGACAAGAGATTTATGGTTATAATCGTTACACAGAGAAACCTTCCAGACCGTTTTGGATGTTTGTCTGGGAAGCATTACACGACGTGACATTAATCATCCTAATATTTTGTGCACTAATTTCTTTAGGCGTTGGAATTGCCACAGAAGGATGGCCGAAGGGAACCTATGATGGTTTAGGAATTCTACTCAGTATACTATTGGTCGTCTTGGTTACTTCTATTAGTGATTACAAGCAGTCTTTGCAATTTAAGGATCTTGACAAGGAGAAGAAAAAAATTTATGTTGATGTCACTAGGGATGGGCTGAGGAAAAAAGTTTTGATTTACGACTTGGTTGTTGGAGACATTGTTCATCTATCCATTGGAGATCAGGTTCCCGCTGATGGGGTTTTCATATCAGGATATAGTCTACTAATTGATGAATCCAGCTTATCAGGTGAGAGTGAACCAGTGAAAAAAGATGAAGAGAAACCATTTCTTCTATCAGGAACCAAAGTGCAAGATGGATCTGGAAAGATGATGGTAACAACAGTTGGTATGAAAACTGAATGGGGAAAGTTGATGGAAACTCTCAGTGAGGGAGGAGAAGATGAGACTCCATTGCAGGTGAAGCTGAATGGTGTAGCAACTCTTATTGGTAAAATTGGATTGACTTTTGCTGTATTGACATTCCTGGTGATGACAGGAAGGTTTCTTGGGGAAAAAGCTGCTCACCGTCAATTTACAAAGTGGACTTCAAGTGATGCACTAAAACTCTTAGATTTCTTTGCTGTTGCAGTTACCATAATAGTTGTTGCAGTTCCTGAGGGTTTACCACTGGCAGTGACATTAAGCCTTGCCTTTGCTATGAAGAAACTGATGGATGAAAGAGCACTAGTTAGGCATCTGTCTGCATGTGAAACAATGGGTTCAACCACTTGCATTTGCACAGATAAAACCGGGACATTAACCACAAACCATATGATAGTTAGCCGTGCATGGGTATGTGAAAATTTTATGGAGAATAAAGACCATGGAAGTGTAGACAAATTGAAATCAGAGATCTCTGAAGACGTTTTAGGCATATTATTGCAGTCCATATTTCAAAATACTAGCTGCGAAGTGACTAAAGATAAGGATGGGAAGAACTCAATCGTTGGTGGAACACCAACAGAATCAGCACTATTAGAGTTTGGCATCCATTTGGGTGGGGATTTTCGTGCCCAACGTACAGAATATAAGATACTTCAAGTAGAGCCTTTCAATTCTGTTAGGAAGAAGATGTCTGTACTTGTAGCGCTTCCTAATGGTGGGGTCAGAGCTTTTGTCAAAGGTGCATCTGAAATAATACTAAGTATGTGTGACACATATATAGATTCCAATGGAGAATCTATTGATTTAAAAGAAGAGAAGGTAAATAATGCTACAAATGTTATCAATAGTTTTGCCAATGAAGCTTTGAGGACACTTTGCTTGGCCTTCAAAGATATAGGGGACTCTAGCGGTAAAACTATTCCAGATGATGGATATACATTAGTTGCAATTGTTGGGATCAAGGATCCTGTACGCCCAGGTGTCAAGGAAGCCGTTAAATCTTGCTTAGCTGCTGGAATAACTGTGCGTATGGTCACTGGTGACAATATTAATACAGCGAAGGCTATTGCTAAAGAATGTGGTATACTAACTGATGATGGTTTAGCTATAGAAGGACCAAACTTCCGTAATTTATCTCCAGAACAGATGAAGCAAATTTTACCAGAAGTCCAGGTGATGGCTCGATCCTTGCCACTGGACAAATACACGTTGGTTAACAATTTGCGGAGTATGGGCGAGGTCGTTGCAGTGACTGGAGATGGGACAAATGATGCTCCAGCATTGCATGAGTCAGATATTGGACTAGCTATGGGAATTGCTGGGACTGAGGTGGCCAAAGAAAATGCCGATGTCATCATAATGGATGACAATTTTTCAACAATTGTAAATGTTGCGAGATGGGGGCGTGCGGTGTACATTAACATACAAAAGTTTGTTCAGTTTCAGCTAACCGTTAACATTGTTGCTCTAGTGATCAATTTTGTTTCTGCTTGCCTCTCAGGATCTGCTCCTCTTACGGCTGTACAGTTGCTTTGGGTGAACTTGATTATGGATACTCTTGGTGCTTTGGCACTGGCCACAGAGCCTCCAAATGATGGACTTATGCAGAGACCTCCAATTCCGAAGGGGGTTAACTTTATTACCAAAGCCATGTGGAGGAACATTTTTGGTCAGAGTATATATCAACTTGCTGTTCTTGCTATTCTTAATTTTGGGGGAAAGCAACTTCTTGGACTTGATGGATCTGATTCCACCATAGTTCTAAACACTTTGATTTTCAACTCATTTGTGTTCTGCCAGGTTTTCAACGAAATTAACAGCCGTGAGATAGAAAAGATCAACATATTCCGAGGGATGTTCAGCAGCTGGATATTTTTGGGAGTAATGGTGTCCACAGTGGGGTTTCAAATAATAATTATAGAATTTCTGGGAGCTTTTGCAAGCACTGTACCACTGAGCCGGGAACTGTGGGGACTGAGTGTGCTGATTGGATTTGTGAGCATGCCAGTTGCAGTTGTGTTGAAGCTCATCCCTGTTAGTAAAGAAGAAGCATTCACAGCTCATCATGATGGCTATGAACCAATCCCTTCTGGCCTAGAGCAGGCTTGA | 3105 | 41.61 | MEQYLLKDFEVEPKRPSEATLRRWRSAVTIVRNRRRRFRNTADLEKRSEAEKKKLKIQEKIRVALYVHKAALQFIDVVNRDEYHLSDEARNVGFSIHPDELASIVRSHDYKALKFYGGVEGLSRKVSVSLDAGVSEKDTSKRQEIYGYNRYTEKPSRPFWMFVWEALHDVTLIILIFCALISLGVGIATEGWPKGTYDGLGILLSILLVVLVTSISDYKQSLQFKDLDKEKKKIYVDVTRDGLRKKVLIYDLVVGDIVHLSIGDQVPADGVFISGYSLLIDESSLSGESEPVKKDEEKPFLLSGTKVQDGSGKMMVTTVGMKTEWGKLMETLSEGGEDETPLQVKLNGVATLIGKIGLTFAVLTFLVMTGRFLGEKAAHRQFTKWTSSDALKLLDFFAVAVTIIVVAVPEGLPLAVTLSLAFAMKKLMDERALVRHLSACETMGSTTCICTDKTGTLTTNHMIVSRAWVCENFMENKDHGSVDKLKSEISEDVLGILLQSIFQNTSCEVTKDKDGKNSIVGGTPTESALLEFGIHLGGDFRAQRTEYKILQVEPFNSVRKKMSVLVALPNGGVRAFVKGASEIILSMCDTYIDSNGESIDLKEEKVNNATNVINSFANEALRTLCLAFKDIGDSSGKTIPDDGYTLVAIVGIKDPVRPGVKEAVKSCLAAGITVRMVTGDNINTAKAIAKECGILTDDGLAIEGPNFRNLSPEQMKQILPEVQVMARSLPLDKYTLVNNLRSMGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACLSGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMQRPPIPKGVNFITKAMWRNIFGQSIYQLAVLAILNFGGKQLLGLDGSDSTIVLNTLIFNSFVFCQVFNEINSREIEKINIFRGMFSSWIFLGVMVSTVGFQIIIIEFLGAFASTVPLSRELWGLSVLIGFVSMPVAVVLKLIPVSKEEAFTAHHDGYEPIPSGLEQA* | 1035 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 33403928 | 33415629 | + | CsaV3_3G040750.1 | Csa03g03769 | 524674 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g03769 | 1034 | CDD | P-type_ATPase_Ca_PMCA-like | 140 | 883 | - | - | |
Csa03g03769 | 1034 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 6 | 49 | IPR024750 | GO:0005516 | |
Csa03g03769 | 1034 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 3 | 1018 | - | - | |
Csa03g03769 | 1034 | PRINTS | H+-transporting ATPase (proton pump) signature | 609 | 627 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Csa03g03769 | 1034 | PRINTS | H+-transporting ATPase (proton pump) signature | 750 | 766 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Csa03g03769 | 1034 | PRINTS | H+-transporting ATPase (proton pump) signature | 782 | 807 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Csa03g03769 | 1034 | Gene3D | - | 133 | 333 | - | - | |
Csa03g03769 | 1034 | Gene3D | - | 165 | 1009 | - | - | |
Csa03g03769 | 1034 | Gene3D | - | 447 | 795 | IPR023214 | - | |
Csa03g03769 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 281 | 295 | - | - | |
Csa03g03769 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 450 | 464 | - | - | |
Csa03g03769 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 648 | 659 | - | - | |
Csa03g03769 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 670 | 680 | - | - | |
Csa03g03769 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 750 | 769 | - | - | |
Csa03g03769 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 774 | 786 | - | - | |
Csa03g03769 | 1034 | Pfam | E1-E2 ATPase | 233 | 428 | - | - | |
Csa03g03769 | 1034 | Gene3D | - | 16 | 77 | - | - | |
Csa03g03769 | 1034 | Coils | Coil | 599 | 619 | - | - | |
Csa03g03769 | 1034 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 116 | 1011 | IPR023298 | - | |
Csa03g03769 | 1034 | Pfam | Cation transporter/ATPase, N-terminus | 117 | 182 | IPR004014 | - | |
Csa03g03769 | 1034 | PANTHER | CATION TRANSPORTING ATPASE | 3 | 1018 | - | - | |
Csa03g03769 | 1034 | Pfam | Cation transporting ATPase, C-terminus | 835 | 1009 | IPR006068 | - | |
Csa03g03769 | 1034 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 456 | 660 | IPR023299 | GO:0000166 | |
Csa03g03769 | 1034 | SFLD | C1.7: P-type atpase like | 432 | 802 | - | - | |
Csa03g03769 | 1034 | Pfam | Cation transport ATPase (P-type) | 506 | 590 | - | - | |
Csa03g03769 | 1034 | SUPERFAMILY | HAD-like | 449 | 855 | IPR036412 | - | |
Csa03g03769 | 1034 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 452 | 458 | IPR018303 | - | |
Csa03g03769 | 1034 | SMART | Cation_ATPase_N_a_2 | 118 | 187 | IPR004014 | - | |
Csa03g03769 | 1034 | SFLD | p-type atpase | 432 | 802 | IPR044492 | - | |
Csa03g03769 | 1034 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 109 | 1011 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Csa03g03769 | 1034 | SUPERFAMILY | Calcium ATPase, transduction domain A | 235 | 331 | IPR008250 | - | |
Csa03g03769 | 1034 | Gene3D | - | 460 | 655 | IPR023299 | GO:0000166 | |
Csa03g03769 | 1034 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 715 | 838 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Csa03g03769 | 1034 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 548 | 696 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Csa03g03769 | 1034 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 202 | 477 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g03769 | Csa-Chr3:33403928 | Csa05g01391 | Csa-Chr5:14841551 | 0 | dispersed | |
Csa06g03896 | Csa-Chr6:30800528 | Csa03g03769 | Csa-Chr3:33403928 | 1.42E-27 | dispersed | |
Csa03g03769 | Csa-Chr3:33403928 | Csa06g03028 | Csa-Chr6:26063517 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g03769 | K01537 | - | csv:101206199 | 1981.07 |