Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03836 ATGATGAAGTGGAATAATTGGATATGGGGAGTGGGTTTATTGTGGTTCTTGGGATTACTGGGATTATGGGGATGGAGAATTGTGAATTGGGTTTGGCTTAGGCCAAAGAGGCTTGAGAAGTTGTTGAGACAGCAAGGCCTCGCCGGCAACTCTTATCGCTTTCTCTTTGGTGATACGAAGGAGATTGGGGTGGCCGTCCGGCAAGCAAGATTGCAGTCCATGACCTTCTCTCATGATATTGCTTCACGTGCCACTCCTTCCTCTTATCCCACCATCCACAAATATGGTAAGAATTCTTTCACATGGATTGGAACAACACCAAGAGTGTATATAACAGAACCAGAACAAGTGAAGATTGCTTTCTCTCAAATAAATGATATTCGAAAGACATCTTCATTTCCCCTTAGACGAAGAATGGGTAGTGGACTTGTCACTCTCGAGGGATCTAAATGGGCTAAACATAGAAAAATCATCAACCCTGCTTTTCACATGGAGAAGTTAAAGGAAATGTTTCCTGCATTCTCGAAGAGTTGTAGAGAAATGGTTAACAAATGGGAAAAGATGATTAATGAAGAAGAAAGTTGTGAAATAGATGTGTGGCCTGATTTACAAAATATGACTGCTGATGTGATTTCAAGAACTGCTTTTGGGAGTAGTTATGACGAAGGAAAAAAAATCTTCCAACTCTTGAAAGAGTGGGCAATGCTATTGATGTCGTACCTAACAAAGAGAGGTTACTACATTCCAGGGGCTAGGTATGTACCAACAAAATTAAACAATAGGATGCAAGAGATTGATACAAAAATACGAGATATGGTTCGGGGTATTATAAACAAAAGACAAAATGGTATGAAGAAGGGTGAAGCTTCCAACAATGAAGATCTATTAGGCATTCTTTTAGAATCAAATGCAAGTCAAATTGAAGAACACAAAAACAAGAAAGATGTTGGAATGAGCATAGAAGAAGTAATTAGTGAATGCAGGCTTTTCTATTTTGCCGGTCAAGAAACCACAGCTGTATTGCTTGCTTGGACAATGGTTCTACTTGGTCGATACCCAGAGTGGCAAGATCGAGCAAGAGCAGAAGTTTTGGAGGTTTTTGGCGATAACAAGAAATTGGATTTCGATGGTTTAAGTCGTCTAAGAGTAGTAAATATGATACTCAATGAAGTTCTTAGGCTGTACCCTCCAGTTGGAATGTTAGCTCGAGAGATTCACAATGAAACAAAATTGGGGAATTTGACATTACCGTGTGGAGTATCAATAGGAGTACCAATCTTAAGCATGCACCAAAATCCCAAAATATGGGGTGAAGATGCACTTGAGTTCAACCCAGAAAGATTTGCAGAAGGAATTTCCAAAGCAACAAAGAATCAAGTATGCTTTATTCCTTTTGGATGGGGTCCTCGTATTTGCATTGGTCAAAACTTTGCAATGATTGAAGCCAAAATAGCATTATCAATGATTTTGCAACAATTCTCATTTACACTTTCTCCAACTTATACTCATGCTCCTATCACACATATCACTATTCAACCACAACATGGAGCTCATCTCATCCTTCGTAAACTGTAA 1575 39.17 MMKWNNWIWGVGLLWFLGLLGLWGWRIVNWVWLRPKRLEKLLRQQGLAGNSYRFLFGDTKEIGVAVRQARLQSMTFSHDIASRATPSSYPTIHKYGKNSFTWIGTTPRVYITEPEQVKIAFSQINDIRKTSSFPLRRRMGSGLVTLEGSKWAKHRKIINPAFHMEKLKEMFPAFSKSCREMVNKWEKMINEEESCEIDVWPDLQNMTADVISRTAFGSSYDEGKKIFQLLKEWAMLLMSYLTKRGYYIPGARYVPTKLNNRMQEIDTKIRDMVRGIINKRQNGMKKGEASNNEDLLGILLESNASQIEEHKNKKDVGMSIEEVISECRLFYFAGQETTAVLLAWTMVLLGRYPEWQDRARAEVLEVFGDNKKLDFDGLSRLRVVNMILNEVLRLYPPVGMLAREIHNETKLGNLTLPCGVSIGVPILSMHQNPKIWGEDALEFNPERFAEGISKATKNQVCFIPFGWGPRICIGQNFAMIEAKIALSMILQQFSFTLSPTYTHAPITHITIQPQHGAHLILRKL* 525
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 33752488 33757436 - CsaV3_3G041420.1 Csa03g03836 524741
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03836 524 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Csa03g03836 524 Gene3D Cytochrome P450 32 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 521 - -
Csa03g03836 524 SUPERFAMILY Cytochrome P450 91 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 22 521 - -
Csa03g03836 524 Pfam Cytochrome P450 94 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g03836 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03836 Csa-Chr3:33752488 Csa04g02242 Csa-Chr4:23069281 0 dispersed
Csa03g03836 Csa-Chr3:33752488 Csa03g03837 Csa-Chr3:33762422 1.52E-29 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03836 - - csv:101207867 1040.8