Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g03836 | ATGATGAAGTGGAATAATTGGATATGGGGAGTGGGTTTATTGTGGTTCTTGGGATTACTGGGATTATGGGGATGGAGAATTGTGAATTGGGTTTGGCTTAGGCCAAAGAGGCTTGAGAAGTTGTTGAGACAGCAAGGCCTCGCCGGCAACTCTTATCGCTTTCTCTTTGGTGATACGAAGGAGATTGGGGTGGCCGTCCGGCAAGCAAGATTGCAGTCCATGACCTTCTCTCATGATATTGCTTCACGTGCCACTCCTTCCTCTTATCCCACCATCCACAAATATGGTAAGAATTCTTTCACATGGATTGGAACAACACCAAGAGTGTATATAACAGAACCAGAACAAGTGAAGATTGCTTTCTCTCAAATAAATGATATTCGAAAGACATCTTCATTTCCCCTTAGACGAAGAATGGGTAGTGGACTTGTCACTCTCGAGGGATCTAAATGGGCTAAACATAGAAAAATCATCAACCCTGCTTTTCACATGGAGAAGTTAAAGGAAATGTTTCCTGCATTCTCGAAGAGTTGTAGAGAAATGGTTAACAAATGGGAAAAGATGATTAATGAAGAAGAAAGTTGTGAAATAGATGTGTGGCCTGATTTACAAAATATGACTGCTGATGTGATTTCAAGAACTGCTTTTGGGAGTAGTTATGACGAAGGAAAAAAAATCTTCCAACTCTTGAAAGAGTGGGCAATGCTATTGATGTCGTACCTAACAAAGAGAGGTTACTACATTCCAGGGGCTAGGTATGTACCAACAAAATTAAACAATAGGATGCAAGAGATTGATACAAAAATACGAGATATGGTTCGGGGTATTATAAACAAAAGACAAAATGGTATGAAGAAGGGTGAAGCTTCCAACAATGAAGATCTATTAGGCATTCTTTTAGAATCAAATGCAAGTCAAATTGAAGAACACAAAAACAAGAAAGATGTTGGAATGAGCATAGAAGAAGTAATTAGTGAATGCAGGCTTTTCTATTTTGCCGGTCAAGAAACCACAGCTGTATTGCTTGCTTGGACAATGGTTCTACTTGGTCGATACCCAGAGTGGCAAGATCGAGCAAGAGCAGAAGTTTTGGAGGTTTTTGGCGATAACAAGAAATTGGATTTCGATGGTTTAAGTCGTCTAAGAGTAGTAAATATGATACTCAATGAAGTTCTTAGGCTGTACCCTCCAGTTGGAATGTTAGCTCGAGAGATTCACAATGAAACAAAATTGGGGAATTTGACATTACCGTGTGGAGTATCAATAGGAGTACCAATCTTAAGCATGCACCAAAATCCCAAAATATGGGGTGAAGATGCACTTGAGTTCAACCCAGAAAGATTTGCAGAAGGAATTTCCAAAGCAACAAAGAATCAAGTATGCTTTATTCCTTTTGGATGGGGTCCTCGTATTTGCATTGGTCAAAACTTTGCAATGATTGAAGCCAAAATAGCATTATCAATGATTTTGCAACAATTCTCATTTACACTTTCTCCAACTTATACTCATGCTCCTATCACACATATCACTATTCAACCACAACATGGAGCTCATCTCATCCTTCGTAAACTGTAA | 1575 | 39.17 | MMKWNNWIWGVGLLWFLGLLGLWGWRIVNWVWLRPKRLEKLLRQQGLAGNSYRFLFGDTKEIGVAVRQARLQSMTFSHDIASRATPSSYPTIHKYGKNSFTWIGTTPRVYITEPEQVKIAFSQINDIRKTSSFPLRRRMGSGLVTLEGSKWAKHRKIINPAFHMEKLKEMFPAFSKSCREMVNKWEKMINEEESCEIDVWPDLQNMTADVISRTAFGSSYDEGKKIFQLLKEWAMLLMSYLTKRGYYIPGARYVPTKLNNRMQEIDTKIRDMVRGIINKRQNGMKKGEASNNEDLLGILLESNASQIEEHKNKKDVGMSIEEVISECRLFYFAGQETTAVLLAWTMVLLGRYPEWQDRARAEVLEVFGDNKKLDFDGLSRLRVVNMILNEVLRLYPPVGMLAREIHNETKLGNLTLPCGVSIGVPILSMHQNPKIWGEDALEFNPERFAEGISKATKNQVCFIPFGWGPRICIGQNFAMIEAKIALSMILQQFSFTLSPTYTHAPITHITIQPQHGAHLILRKL* | 525 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 33752488 | 33757436 | - | CsaV3_3G041420.1 | Csa03g03836 | 524741 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g03836 | 524 | PRINTS | E-class P450 group I signature | 92 | 111 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | E-class P450 group I signature | 385 | 403 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | E-class P450 group I signature | 426 | 450 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | E-class P450 group I signature | 462 | 472 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | E-class P450 group I signature | 472 | 495 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 465 | 474 | IPR017972 | GO:0005506|GO:0016705 | |
Csa03g03836 | 524 | Gene3D | Cytochrome P450 | 32 | 524 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 22 | 521 | - | - | |
Csa03g03836 | 524 | SUPERFAMILY | Cytochrome P450 | 91 | 522 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PANTHER | 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED | 22 | 521 | - | - | |
Csa03g03836 | 524 | Pfam | Cytochrome P450 | 94 | 508 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | P450 superfamily signature | 386 | 397 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | P450 superfamily signature | 463 | 472 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g03836 | 524 | PRINTS | P450 superfamily signature | 472 | 483 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g03836 | Csa-Chr3:33752488 | Csa04g02242 | Csa-Chr4:23069281 | 0 | dispersed | |
Csa03g03836 | Csa-Chr3:33752488 | Csa03g03837 | Csa-Chr3:33762422 | 1.52E-29 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g03836 | - | - | csv:101207867 | 1040.8 |