Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03857 ATGTATGGTTTCGAAGCCCTTACCTTCAACATTCATGGAGGCTATTTGGAGGCCATCGTCCGGGGACATAGGGCTGGGTTGCTGACCGCCGCTGATTATAACAATTTGTGTCAGTGCGAAACCCTAGATGATATCAAGATGCACCTCTCTGCCACTGAGTATGGCCCTTATCTCCAAAACGAACCATCTCCGTTACATACAACAACGATTGTGGAGAAATGCACCCTTAAACTGGTTGATGAGTATAAGCACATGTTGTGCCAAGCCACTGAGCCTCTGTCTACCTTCTTAGAATATATCACATATGGTCACATGATCGACAATGTTGTCCTCATTGTTACTGGAACCTTGCATGAGAGAGATGTTCAGGAACTGTTGGAGAAGTGCCACCCTTTGGGCATGTTTGACAGCATTGCTACCTTGGCAGTTGCTCAGAATATGCGAGAACTTTACAGATTGGTGCTTGTTGACACCCCTTTGGCTCCATACTTCTCAGAGTGTATTACATCCGAGGATTTGGATGACATGAACATAGAAATTATGAGGAACACTCTCTACAAGGCATACTTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCAGATAGAAGGGCTGTGAATATTACCATAAATAGTATTGGCACTGAGCTTACCCGTGATGACCGAAGAAAGTTGTATTCCAATTTTGGCTTACTTTATCCCTATGGTCACGAGGAACTTGCAATCTGTGAAGATATTGATCAGGTCCGCGGTGCCATGGAAAAATACCCTCCCTACCAGTCAATTTTTTCCAAGCTCTCATATGGAGAGAGTCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGGCTATGCTTAGCATTTGAGCAACAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGGGAACAGGAGATTAGGAACCTAATGTGGATTTCGGAGTGCGTCGCTCAGAACCAGAAGTCGAGGGTTCACGACAGTGTTGTCTTCATATTTTAG 1056 44.6 MYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF* 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33988110 33993140 + CsaV3_3G041630.1 Csa03g03857 524762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03857 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Csa03g03857 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Csa03g03857 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Csa03g03857 351 Gene3D - 91 199 IPR035067 -
Csa03g03857 351 Gene3D - 206 309 IPR035067 -
Csa03g03857 351 PANTHER V-TYPE PROTON ATPASE SUBUNIT 1 351 - -
Csa03g03857 351 SUPERFAMILY V-type ATP synthase subunit C 14 349 IPR036079 -
Csa03g03857 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03857 K02146 - csv:101203260 715.687