Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03914 ATGGATCTGGAGAGTGCTATTGGGGGCCACCCAATCAAGAAAGATTCATGGAGAGCTGTTTTAACGTTAGCTTATCAGAGCTTGGGGGTTGTTTATGGAGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGTACTTTTGCTGAGGATATTAAACACTCTGAAACCAACGAAGAGATTTATGGAGTTCTTTCTTTTGTCTTCTGGACTCTCACGCTCATTCCTTTGATTAAGTATGTATTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGAGGAACTTTCGCTTTATACTCATTGCTCTGTCGCCATGCTCGAGTTAGCTCCTTGCCCAATTGCCAACTTGCAGACGAGGACCTTTCGGAATATACAAAAGATGGGGTGGATTTAACCAACAAGAAGACCTGTGGGTCGAGATTGAAATCGACATTAGAGAAGCACAGAGTGCTCCAGAGGGTTTTGCTTGTTCTAGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTTCAATTTCTGTTTTCTCTGCTGTTTCTGGGTTGGAACTTTCCATGGCTAAACCACACCATCGCTATGTTGAAGTCCCAGTTGCTTGTGCCATATTGGTTATCCTGTTTGCAATTCAACATTATGGAACCCATCGAGTCGGGTTTCTATTTGCACCAGTTGTAATTACATGGCTTCTGTGTATCAGTGCCATAGGGCTGTACAATATCTTCTACTGGAATCCTCATGTTTACCGAGCACTCTCCCCTTATTATATGTACAAATTTCTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTCGGCGGGATCCTGCTATGTATGACAGGTTCAGAAGCAATGTTTGCTGATCTTGGGCACTTCTCGCAGCTATCCATCAAGATTGCTTTCTCTTTTGTGGTTTATCCATCTTTGGTCCTGGCGTACATGGGACAAGCTGCTTATCTCTCTCAACATCACGGGGACAGTAACTACCAAGTTGGATTTTACGTGTCTGTTCCTGAGAAGTTAAGATTGCCTGTTCTTGTGATCGCCATTTTAGCCGCAGTGGTAGGAAGTCAAGCTGTCATTACTGGCACTTTTTCGATAATAAAACAGTGCTCCGCATTGGGTTGCTTCCCGAGGGTCAAAATTGTTCATACCTCCTCGAAAATCCATGGTCAGATTTATATACCAGAGATCAATTGGACGTTGATGCTCTTATGCTTGGCTATTACCATTGGCTTTCGAGACACAAAACGCATGGGCAATGCATCAGGCTTAGCAGTGATAACTGTTATGCTGGTGACAACCTGCTTAATGTCTGTAGTCATCATCTTGTGCTGGCATAAAAGCTTTGTCTATGCCATTGCCTTCATACTCATTTTCGGGTCCATCGAATCACTCTACTTTTCAGCATCTCTCATCAAGTTTCGAGAAGGGGCCTGGGTTCCGATCGCCCTCTCACTCATCTTCCTAATAGTCATGTATGTATGGCATTACGGAACACGCAAAAAATACGAGTTTGATGTTCAAAATAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGCCCCAGTTTAGGCATTGTCAGAGTACGTGGAATTGGCCTCATATATACCGAACTCGTCGCAGGAATCCCCGCTATCTTCTCCCACTTCGTAACAAACCTCCCCGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCTGTCCCAGTCCCACATGTAAGACCTGGAGAAAGGTTCCTAGTAGGCAGAGTTGGGCCAAAAGAGTACCGCCTCTACCGATGCATAGCACGATATGGCTACCGTGACATCCACAAGGACGACATGGAGTTCGAGAAGGACTTGGTATGCAGCATTGCAGAGTTCATCCGTTCCGAGAAAGCAGAAACCAGCGTAAAGCTAGAAGATGCAGAAGAAAGTGAGAGAATGACAGTAGTAGGAACATCTTCAACAAATGTAGATGGAGTAAGAATGTGTGAAGATGAAGGAGAAACAGCAGAAACATCAGAGGTAAGAGAGATAAAATCACCAAAAAAACTGAGGAAAAGAGTGAGATTTCTTGTACCAGAGAGCCCACAAATGGAAACGGAAGCAAGGAGAGAGCTTCAAGAGCTAATGGAAGCTAGAGAAGCAGGAATGGCTTTCATAATGGGACATTCATATGTGAAAGCAAAGAGGGGATCAGGTTGGGTGAAGAAAGTGGTGATAAATTATGGGTATGATTTTTTGAGAAGAAACTCAAGAGGGCCAAGTTATGCTTGGAGTGTGCCTCATGCATCTACTTTAGAGGTGGGAATGGTCTACCAAGTTTGA 2316 44.26 MDLESAIGGHPIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGVDLTNKKTCGSRLKSTLEKHRVLQRVLLVLALIGACMVIGDGVLTPSISVFSAVSGLELSMAKPHHRYVEVPVACAILVILFAIQHYGTHRVGFLFAPVVITWLLCISAIGLYNIFYWNPHVYRALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHGDSNYQVGFYVSVPEKLRLPVLVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAITIGFRDTKRMGNASGLAVITVMLVTTCLMSVVIILCWHKSFVYAIAFILIFGSIESLYFSASLIKFREGAWVPIALSLIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVAGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEKAETSVKLEDAEESERMTVVGTSSTNVDGVRMCEDEGETAETSEVREIKSPKKLRKRVRFLVPESPQMETEARRELQELMEAREAGMAFIMGHSYVKAKRGSGWVKKVVINYGYDFLRRNSRGPSYAWSVPHASTLEVGMVYQV* 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34316948 34322584 - CsaV3_3G042200.1 Csa03g03914 524819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03914 771 Coils Coil 621 641 - -
Csa03g03914 771 Pfam K+ potassium transporter 25 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa03g03914 771 TIGRFAM kup: potassium uptake protein 23 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
Csa03g03914 771 PANTHER POTASSIUM TRANSPORTER 6 1 771 - -
Csa03g03914 771 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g03914 Csa05g02350 CCT
Csa03g03914 Csa05g02350 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01021 Csa-Chr1:6337959 Csa03g03914 Csa-Chr3:34316948 0 dispersed
Csa03g03914 Csa-Chr3:34316948 Csa04g00208 Csa-Chr4:1222425 0 dispersed
Csa01g02530 Csa-Chr1:22301381 Csa03g03914 Csa-Chr3:34316948 0 transposed
Csa03g01999 Csa-Chr3:15871980 Csa03g03914 Csa-Chr3:34316948 0 transposed
Csa04g00943 Csa-Chr4:7044794 Csa03g03914 Csa-Chr3:34316948 0 transposed
Csa05g00886 Csa-Chr5:6809332 Csa03g03914 Csa-Chr3:34316948 0 transposed
Csa05g01229 Csa-Chr5:12915450 Csa03g03914 Csa-Chr3:34316948 0 transposed
Csa05g02908 Csa-Chr5:29584874 Csa03g03914 Csa-Chr3:34316948 0 transposed
Csa03g03914 Csa-Chr3:34316948 Csa05g02350 Csa-Chr5:25816821 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03914 K03549 - csv:101211664 1514.98