Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g03932 ATGAAAGAAAAGAGTGAAACTGGAGGTGGGTATGTGAGAGCAGATCAAATAGATCTGAAGAGTTTAGATGAGCAGTTACAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGGAGGGAAGATGAGGAAGGTGTCGGCATCGGCGGCGGCGGCGGCGGCGGCGGTGGTGGAGGAGGTGTTGGCGGTGGAAGACCCGCAATCACTAGACAGGAGTGGGAGATTGACCCTTCCAAACTCATCATCAAAGCTGTCATAGCTCGTGGCACTTTTGGAACTGTTCATCGTGGAGTTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGAGAAGAGGGTCATAGGTCAGAGGCAGAAATCGCGTCCCTTAGAGCGGCTTTTACGCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTTACAAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACACATACAAACAGAAAATGGCCAAATTGGCATGCCCAGCAATATTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCTCTGAAATCCTACCTCATAAAGAACAGAAGGAAAAAGCTGGCTTTCAAAGTAGTCGTCCAGCTAGCTTTAGACCTTGCAAGAGGGTTGAGCTATCTTCATTCACAGAAGATTGTTCATAGAGATGTCAAAACAGAAAATATGCTTCTGGACAAAACGAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTTGAAGCCTCAAATCCCAATGATATGACTGGTGAGACTGGAACACTTGGGTATATGGCTCCGGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTCGGCATCTGTTTATGGGAGATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCAGAAGTTACATCAGCTGTTGTCCGACAGAATCTGAGGCCAGAGATTCCTCGGTGTTGCCCCAGCTCGCTTGCAAATGTAATGAAGCGATGCTGGGATGCTAACCCGGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATTGATACATCGAAGGGCGGAGGTATGATCCCCCTCGATCAGTCACAAGGCTGTTTTTGCTTCCGTAGGTACCGGGGGCCTTGA 1158 47.06 MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKRREDEEGVGIGGGGGGGGGGGGVGGGRPAITRQEWEIDPSKLIIKAVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATIGSSDLHIQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPLDQSQGCFCFRRYRGP* 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34431060 34435738 - CsaV3_3G042380.1 Csa03g03932 524837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g03932 385 SMART serkin_6 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g03932 385 MobiDBLite consensus disorder prediction 32 69 - -
Csa03g03932 385 Gene3D Phosphorylase Kinase; domain 1 69 166 - -
Csa03g03932 385 PRINTS Tyrosine kinase catalytic domain signature 179 192 IPR001245 GO:0004672|GO:0006468
Csa03g03932 385 PRINTS Tyrosine kinase catalytic domain signature 217 235 IPR001245 GO:0004672|GO:0006468
Csa03g03932 385 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Csa03g03932 385 PRINTS Tyrosine kinase catalytic domain signature 327 349 IPR001245 GO:0004672|GO:0006468
Csa03g03932 385 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 379 - -
Csa03g03932 385 CDD STKc_MAP3K-like 88 356 - -
Csa03g03932 385 Pfam Protein tyrosine and serine/threonine kinase 84 356 IPR001245 GO:0004672|GO:0006468
Csa03g03932 385 Gene3D Transferase(Phosphotransferase) domain 1 182 372 - -
Csa03g03932 385 MobiDBLite consensus disorder prediction 32 48 - -
Csa03g03932 385 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 379 - -
Csa03g03932 385 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g03932 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Csa03g03932 385 SUPERFAMILY Protein kinase-like (PK-like) 68 356 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01303 Csa-Chr3:9965135 Csa03g03932 Csa-Chr3:34431060 9.18E-168 dispersed
Csa03g03932 Csa-Chr3:34431060 Csa07g01691 Csa-Chr7:17390292 0 dispersed
Csa01g00844 Csa-Chr1:5290383 Csa03g03932 Csa-Chr3:34431060 1.85E-68 wgd
Csa01g00159 Csa-Chr1:1031695 Csa03g03932 Csa-Chr3:34431060 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78066 PF07714 PK_Tyr_Ser-Thr 2.70E-64 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g03932 - - csv:101212631 757.288