Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04014 ATGGAGTTCGTAGGCGAGAACAGGGATTTTGATTCTGCAAACGACAACAACAAGCCCAACTCTGCTCAACCACTTCTTGATTCTTCTTTTCAACCCTCACTCGCTGATGATACTAATGCCAAAGAAGCTGAAGAATTAAGTGAACGCATAGCTCGAGACCTCAAGGATGGTCTTCATCCTCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACATCATATGAGGACAACATAAAAAAGATTGTGGACTTTAGCTCGGTCGAAGGTTTTTGGATAAGCTATTGTCATTTGGCTCGTCCGGCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATTCGTCCACTTTGGGAGGATTCTGCCAACTGTAATGGTGGGAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGATCAACTTGATTTTGGCGATAACATATGTGGTGCTGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTTTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCACATGGATATGTAATGGAATACAAACCTCACGACGCGTCTCTGCGTGATAACTCGTCATACAGAAACACTTGGTTGCGAGGATGA 717 44.07 MEFVGENRDFDSANDNNKPNSAQPLLDSSFQPSLADDTNAKEAEELSERIARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWISYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG* 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35065910 35080976 - CsaV3_3G043200.1 Csa03g04014 524919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04014 238 Gene3D RNA Cap, Translation Initiation Factor Eif4e 31 231 IPR023398 -
Csa03g04014 238 SUPERFAMILY eIF4e-like 43 234 IPR023398 -
Csa03g04014 238 Pfam Eukaryotic initiation factor 4E 60 218 IPR001040 GO:0003723|GO:0003743|GO:0006413
Csa03g04014 238 MobiDBLite consensus disorder prediction 14 36 - -
Csa03g04014 238 MobiDBLite consensus disorder prediction 1 42 - -
Csa03g04014 238 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Csa03g04014 238 PANTHER BNAA10G16710D PROTEIN 39 238 - -
Csa03g04014 238 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 39 238 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01033 Csa-Chr2:10011592 Csa03g04014 Csa-Chr3:35065910 2.57E-30 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04014 K03259 - csv:101204290 498.434