Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g04086 | ATGGATTCTTTGTGGATATTTGTGCAGCTCATCACAGCTGCAGCTTTCATATCTTCCACAATCATAATCCTCAGAAACTTCATCATCCCCACCACACCATTGTCATCTTCTTCAAACTCCTTCACCTCCTCCAACAATCCTTCACTTCCTTCCGGCTCCCTCGGTCTCCCCTTCGTTGGTGAAACCCTCCACTTCGTCTCTTCTGCTTACTCTCACCGCCCCGACACCTTCATGGACACACGTCGCCGACGGTATGGGAAGGTTTTCAAATCGCATATATTTGGAAGTCCAACAATAGTTTCAACAGATGGTGAAGTGAATAGGTTTATTCTACAAAGTGATTCAAAGTATTTTGTGCCATCTTATCCAAAATCTGTGACAGAGTTGATGGGAAAATCTTCTATTTTGCTTATCAATGGCACTTTACATAGAAGAATTCATGGTCTTATTGGAGCTTTTTTCAAATCATCTCATCTCAAAGCTCAAATAACCTTAGACATGCAAAAATATCTTCACAAATCCATCTCTACTTGGACTAGTACTTGTCAACAGAATCCTATCCACATTCAAGATGAAGCCAAAAATATTGCCTTTGAAGTACTAGTAAAGACACTGATCAGTTTGGAGAGTGGTGAAGAAATGGAATTTCTGAAGAAACAGTTTAATCAATTCATCGCTGGGATTATGGCTTTCCCAATAAACATCCCAGGAACCACACTTTACAGATCATTACAGGCAAAAAGAAAAATGGTGAAGTTAGTGGAAGAAATAATAGAAGGAAGAAGAAAGAAGAAGAAGATCAAGAGTGAAAAATGGAGTAACAATCACAATAATAATAAGAATGGAGTTGGAATAATAAATGATGTTGTGGATGTTTTGTTGAATGATGGAAGCCAACAAGTAACAGATGAAGTTATAGCTCATAATATGATTGATATGATGATTCCAGGCCAAGATTCTGTCCCAATCCTTATCACTTTGGCCATTAAATACCTTTCTGATTCTCCCTCTGCCCTTCAACAATTAACGGAAGAGAACATGGAATTGAAAAGACAGAAAACTCAGTTTGGAGAGCCATTGAAGTGGAGTGATTACTTGTCTTTACCATTTACACAAAATGTGATAACAGAGACGTTAAGGTTAGGAAACATAATAACAGGAGTGATGAGAAAGGCAATGAAAGACATTGAAATAAAAGGATATTTAATTCCAAAAGGATGGTGTGTACTTGCATATATTAGGTCAGTTCATGTCGATGAAAACCACTTTGAAAGCCCTTACCATTTCAATCCATGGAGATGGCAAGGTAAAGACTCAAATAATTTGAATTTCAGTCCTTTTGGAGGAGGACAAAGGTTGTGCCCAGGCCTTGAATTAGCCAGATTAGAAGCTTCCATTTTCTTACATCACTTCGTTACTGAATTCAGGTGGGTGGCCGAGGAAGACAATATTATCAACTTCCCAACAGTAAGAATGAAGAAGAGAATGGCAATTTGGGTAAAAAAGAGAGATCTTTAA | 1518 | 38.08 | MDSLWIFVQLITAAAFISSTIIILRNFIIPTTPLSSSSNSFTSSNNPSLPSGSLGLPFVGETLHFVSSAYSHRPDTFMDTRRRRYGKVFKSHIFGSPTIVSTDGEVNRFILQSDSKYFVPSYPKSVTELMGKSSILLINGTLHRRIHGLIGAFFKSSHLKAQITLDMQKYLHKSISTWTSTCQQNPIHIQDEAKNIAFEVLVKTLISLESGEEMEFLKKQFNQFIAGIMAFPINIPGTTLYRSLQAKRKMVKLVEEIIEGRRKKKKIKSEKWSNNHNNNKNGVGIINDVVDVLLNDGSQQVTDEVIAHNMIDMMIPGQDSVPILITLAIKYLSDSPSALQQLTEENMELKRQKTQFGEPLKWSDYLSLPFTQNVITETLRLGNIITGVMRKAMKDIEIKGYLIPKGWCVLAYIRSVHVDENHFESPYHFNPWRWQGKDSNNLNFSPFGGGQRLCPGLELARLEASIFLHHFVTEFRWVAEEDNIINFPTVRMKKRMAIWVKKRDL* | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 35819170 | 35824357 | + | CsaV3_3G043920.1 | Csa03g04086 | 524991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g04086 | 505 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506|GO:0016705 | |
Csa03g04086 | 505 | PANTHER | CYTOCHROME P450 26 | 25 | 497 | - | - | |
Csa03g04086 | 505 | Gene3D | Cytochrome P450 | 38 | 503 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g04086 | 505 | SUPERFAMILY | Cytochrome P450 | 46 | 503 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g04086 | 505 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 | 25 | 497 | - | - | |
Csa03g04086 | 505 | Pfam | Cytochrome P450 | 50 | 483 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g04086 | 505 | PRINTS | E-class P450 group I signature | 82 | 101 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g04086 | 505 | PRINTS | E-class P450 group I signature | 372 | 390 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g04086 | 505 | PRINTS | E-class P450 group I signature | 412 | 436 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g04086 | 505 | PRINTS | E-class P450 group I signature | 444 | 454 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g04086 | 505 | PRINTS | E-class P450 group I signature | 454 | 477 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g04086 | Csa-Chr3:35819170 | Csa06g03288 | Csa-Chr6:27579040 | 6.50E-141 | dispersed | |
Csa01g00777 | Csa-Chr1:4929995 | Csa03g04086 | Csa-Chr3:35819170 | 5.09E-72 | transposed | |
Csa03g00357 | Csa-Chr3:2950595 | Csa03g04086 | Csa-Chr3:35819170 | 3.79E-87 | transposed | |
Csa05g00809 | Csa-Chr5:5807093 | Csa03g04086 | Csa-Chr3:35819170 | 5.36E-131 | transposed | |
Csa05g01875 | Csa-Chr5:21981719 | Csa03g04086 | Csa-Chr3:35819170 | 1.83E-88 | transposed | |
Csa06g00029 | Csa-Chr6:208797 | Csa03g04086 | Csa-Chr3:35819170 | 1.97E-90 | transposed | |
Csa03g04086 | Csa-Chr3:35819170 | Csa07g02396 | Csa-Chr7:22043310 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g04086 | K12638 | - | csv:101212581 | 946.036 |