Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04111 ATGGCAGCTCTCCAATTCTTCCTCCTCCTTCTTCTTTCCAGTTTCGCTCTCTTTCATTTCGTCTCTTCACAGAATCCTTCAGGTTTCATCAGTTTAGATTGTGGGCTTCCGGCGAATTCCACATACACAGAGCCAAACACCGGAATAATATACGAATCCGATGCGTCCTTCATTAATTCCGGTGAAATCCACAACATTTCCGCTGATAATATAAACAATGTCTTGAAACAGCCGCTGTGGAGTGTGAGGAGCTTTCCGGAAGGAATTAGGAATTGCTACAAATTGAAAGTGAGGAACGGGACGAAGTATTTGATTCGAGCTGTGTTTCGGTACGGAAATTACGATGGTAGAAGGACTCTGCCTGAATTTAATCTGTATTTTGGAGCGAATTTTTGGGACTCGGTTGCATTTGTAGGAGATTTCACAGTGAGGAAGGAAATTGTGCATATAGTTTCATCAAATGATGTGCAAATCTGTGTTGTGAATAATGGAACTGGAACTCCGTTTATTTCTGCTTTGGAATTAAGGCCTCTGGAAGACACTGCATACGATACTGGATCTTTGACAGTTGCTAGTTTCGTACGCCTTGACTACGGCACCCTTGATAATCAAACTATCAGGTATAAAGACGATGTCTACGATCGAATCTGGGATCCCCCAGTTCCTATTCGAGGATGGACAACTATAAACACTTCGGAGAAAGTTTCCGTCAACGATCCGCTCTTCTTCCAGCCGGCTCCGGCAGTTATGAACACAGCGGCGACACCGAGTAACGAAAGCGCTCCGATGGCGTTCTTTTGGGAGCCGCCGGATTCGACGACGGCGTTTTTCGTGTACATGTATTTTGCGGAGCTAAAGGTGCTTAAAGCGAATGAATCTAGAGAGTTCGACGTATTATTGAACGGAAGACGGTGGCATAATGAATCGCTTTCTCCCAGGTACTTAGAGGAATTGGTGTTTTACAGCACCGCGCCTCTGACAGGGGGAAACTACCAGATCTCCTTCGTTAGAACTCCCAATTCAACTCTTCCTCCCATTCTCAATGCTCTTGAGATTTATCGAGTTCTTAATTTCTCGGAATCAGAGACCAGTGGGGAAGATGTTCTCGCCATTGAAAACATCAAGGCCATTTATGGAGTTAAAAGAAACTGGCAAGGTGATCCCTGTGCCCCAAGGGAATTCATTTGGCAAGGACTCAACTGTAGCTTTCTGAATTTTGAGCCTCCCAGAATCATATCCTTGAATTTATCCTCCAGTGGACTGACAGGGGAAATACCTCGAGAAATAGAAAATCTTAAAATGCTGGAGAATCTAGATCTATCAAACAATAGTTTGAGTGGACCAGTGCCTGATTTTCTCATTCAATTGTCATCCTTGCGAGTGCTAATCTTGGAAAGAAACAAGCTTTCAGGACTAATTCCGGCTCAGCTCGTAGAGAAGTCCAATAATGGCTCTCTGACATTAAGATTTGGTGACAATCCAAATTTGTTTGCTACGGCTCCACGCAAAAGAAATATTGTTGTTCCTGTAGTAGCATCAGTTGTTGGATTTTTTCTGCTTTCGTTCTTAATTGCAGCGGCTATCTTTTGGAGGACAAAAAGAAGAAAATCAAAAGGAGCTGAACTGGGAGATGTGAAACAAACTGTTGATATATCTCAAAATTGGGACACGACCAAGAGATGTTATTCATACTCGGATGTCCTAAGAATGACAAACAATTTCGAGCGTATGCTTGGAGAGGGAGGCTTTGGAAGAGTTTACTATGGAAAAATAGGGAACGATGAAGTAGCTGTCAAAATGCTGTCTCCTCGATCAGTTCAAGGGTATCAACAATTTCAAGCAGAGGTTGAACTCCTTATGAGGGTTCACCACAGAAACCTGACTGGACTTGTTGGGTATTGCAATACGCCAGCCTACAAAGGACTTATCTACGAGTACATGGGCAGAGGGAACCTAGGATCTATCATGTCAGATGGCAAGTCGGCTTTATTGAACTGGATAGACAGACTTCATATAGCAGTTGATGCAGCACAAGGATTGCAATACTTGCATTCTGGTATAAAGCCAGCTATTGTACATAGAGATGTAAAATCTTCCAACATCTTGTTGGATGACAACTTTCGAGCAAAAGTATCTGATTTCGGCTTATCGAGAATTTTTCCTGTTGACGATAGTGCCACTCATGTCACAACCAATGTGGTCGGCACTCCCGGTTACCTTGACCCTGAGTACTACACATCTTATAGATTAAATGAAAAAAGTGACGTTTATGGCTTTGGAATTGTTCTTCTAGAAATCATAACTGGAAGACCAGTTTTGACAAAGACTCAAGACAAGATAACACATATCTATCAGTGGGTTGACTCAATGGTTTCTCAAGGTGATATCAGTTCCATCATCGATCCAAAATTGAAAGAAGATTTTGAGGTGAACACCATTTGGAAAGCGGTTGAAATAGCAATGTCATGTGCATCTCCTATGTCTACAAATAGGCCAACCATGAGCCAAGTTGTGATCGATTTGAATGAATGTTTGAAAATGGAGTTAGCTCAAAGTAACAACAATCCTCAACCTGAATCTGTAGTTGAAGATCATGTTTCTCTGTTTTGTCCAGAGGCGAGGTAG 2625 42.36 MAALQFFLLLLLSSFALFHFVSSQNPSGFISLDCGLPANSTYTEPNTGIIYESDASFINSGEIHNISADNINNVLKQPLWSVRSFPEGIRNCYKLKVRNGTKYLIRAVFRYGNYDGRRTLPEFNLYFGANFWDSVAFVGDFTVRKEIVHIVSSNDVQICVVNNGTGTPFISALELRPLEDTAYDTGSLTVASFVRLDYGTLDNQTIRYKDDVYDRIWDPPVPIRGWTTINTSEKVSVNDPLFFQPAPAVMNTAATPSNESAPMAFFWEPPDSTTAFFVYMYFAELKVLKANESREFDVLLNGRRWHNESLSPRYLEELVFYSTAPLTGGNYQISFVRTPNSTLPPILNALEIYRVLNFSESETSGEDVLAIENIKAIYGVKRNWQGDPCAPREFIWQGLNCSFLNFEPPRIISLNLSSSGLTGEIPREIENLKMLENLDLSNNSLSGPVPDFLIQLSSLRVLILERNKLSGLIPAQLVEKSNNGSLTLRFGDNPNLFATAPRKRNIVVPVVASVVGFFLLSFLIAAAIFWRTKRRKSKGAELGDVKQTVDISQNWDTTKRCYSYSDVLRMTNNFERMLGEGGFGRVYYGKIGNDEVAVKMLSPRSVQGYQQFQAEVELLMRVHHRNLTGLVGYCNTPAYKGLIYEYMGRGNLGSIMSDGKSALLNWIDRLHIAVDAAQGLQYLHSGIKPAIVHRDVKSSNILLDDNFRAKVSDFGLSRIFPVDDSATHVTTNVVGTPGYLDPEYYTSYRLNEKSDVYGFGIVLLEIITGRPVLTKTQDKITHIYQWVDSMVSQGDISSIIDPKLKEDFEVNTIWKAVEIAMSCASPMSTNRPTMSQVVIDLNECLKMELAQSNNNPQPESVVEDHVSLFCPEAR* 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36024007 36030319 - CsaV3_3G044170.1 Csa03g04111 525016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04111 874 Gene3D Transferase(Phosphotransferase) domain 1 647 866 - -
Csa03g04111 874 Pfam Protein tyrosine and serine/threonine kinase 574 840 IPR001245 GO:0004672|GO:0006468
Csa03g04111 874 SUPERFAMILY L domain-like 371 478 - -
Csa03g04111 874 Pfam Malectin-like domain 32 355 IPR024788 -
Csa03g04111 874 SMART serkin_6 572 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g04111 874 ProSiteProfiles Protein kinase domain profile. 572 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g04111 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Csa03g04111 874 PANTHER OS07G0107800 PROTEIN-RELATED 14 840 - -
Csa03g04111 874 SUPERFAMILY Protein kinase-like (PK-like) 554 841 IPR011009 -
Csa03g04111 874 Gene3D Ribonuclease Inhibitor 370 488 IPR032675 -
Csa03g04111 874 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 14 840 - -
Csa03g04111 874 Gene3D Phosphorylase Kinase; domain 1 544 646 - -
Csa03g04111 874 ProSitePatterns Protein kinases ATP-binding region signature. 578 599 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g04111 Csa07g02412 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04111 Csa-Chr3:36024007 Csa07g02412 Csa-Chr7:22148259 0 dispersed
Csa04g01793 Csa-Chr4:17601678 Csa03g04111 Csa-Chr3:36024007 3.88E-12 dispersed
Csa03g04110 Csa-Chr3:36012252 Csa03g04111 Csa-Chr3:36024007 0 tandem
Csa03g04111 Csa-Chr3:36024007 Csa03g04112 Csa-Chr3:36036381 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78079 PF12819 Malectin_like 6.40E-110 CL0202 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04111 - - csv:101215225 1728.38