Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04190 ATGTATCTTCTTCTTCTTCTTCTCCTTCTTACAATCCTTCTCAAATTCCTCTACTCCACTTTCTGGCTTCCATGGACAATTCAAACCCACTTCCGAAAGCAGGGCATAACAGGTCCTCCCTACCGTCCCTTCATCGGCAATTCCGCCCATATCCGCCGTCTGTTCAAGGAGGCACAATCCAACCCCATTCCCTTTCACCATGATATACTCTCTCGCGTTCTTCCTTTTTACTTTCAATGGTCCCGTCAGTACGGAAAGACCTTCCTTTACTGGTTCGGCTCCAAACCCAGATTGGCCATATCCGACCCTGATCTAATTAAGGAAGTCCTTGTCAATACGCGTGGCTATTTTCGAAGGATCCACTTCAATCCCCTCTCCAAGGTGCTTTTCGGAGAGGGACTTATCGGACTAGAGGGAGAAAAATGGGTGGCGCGCCGCAAAATTGCAAATCAGGCTTTCAACATAGAACGAGTAAAGGGATGGGTACCCGAAATTGTTGTTAGTGTGTTGAGTGTGTTGGAGAAATGGGAAGAGATGAAAGGTGGAATGGAGGAGTTTGAATTGGACGTCCACAAAGAAGTTCGTCGTCTCTCAGCAGACGTTATTTCGAGAACTGCATTTGGAAGTAACTTTGAAGAAGGAAAGCGCATCTTCAGTTTGCAGGAACAACAAACATATCTTTTCTCCCAAGCAATCAGAAGCGTTTATATTCCTGGCTTCAGATTTTTGCCAACCAAGAAGAACAGAGAAAGGTGGAGCCTGGAGAAAGAAACCCGTGAATTGATAAAAGTGCTGATTGAGACAAATAGCAAAGGAAGGGAAAACGCAACTAATCTACTTAGCATGTTAATGTCATCTTACAAGAACCAGAATGGGGAAGAAGAAAGGCTTGGAATAGAGGATATCATTGATGAGTGTAAGACATTCTATTTTGCAGGAATGGAAACAACTGCTCATCTTTTAACTTGGGCCCTTTTGCTACTGGCAAAGCATCAAGAATGGCAAGACAAGGCCCGAGAAGAAGTTCTCAAAGTCTGTGGGTACAAAAAACCTCCTGCAGCTGAGAATTTGAATGAACTTAAACTTGTAGGTATGATAATTAACGAAACACTCCGACTTTATTCTCCAGCAGTGATGTTGACGAGGACGGCATCGAAACAGCTGACACTAGGAAGCTTAGACATTCCTGCTGGCACAGAGCTTTTCTTGGCATTGGCTGCCGTCCACCATGACAAAGAGTTTTGGGGAGAGGATGCAAACTGCTTCAATCCTTTGAGATTTTGCGAGCCTCGGAAACATTTAGCTTCGTTTCTGCCATTTTCGTTAGGTCCCAGAATCTGCGTAGGCCAAAACTTGGCATTGATTGAAACCAAAGTCGCTTTGGCTATGATAATTCAACGATTCTCTTTTGCTGTTTCTCCAACCTATACTCATTCCCCCATGCTGTTCATAACCTTACAGCCTCAGTTTGGTGCTCAGCTCCTTTTTAGGAGTCTACGGAATTGA 1506 44.29 MYLLLLLLLLTILLKFLYSTFWLPWTIQTHFRKQGITGPPYRPFIGNSAHIRRLFKEAQSNPIPFHHDILSRVLPFYFQWSRQYGKTFLYWFGSKPRLAISDPDLIKEVLVNTRGYFRRIHFNPLSKVLFGEGLIGLEGEKWVARRKIANQAFNIERVKGWVPEIVVSVLSVLEKWEEMKGGMEEFELDVHKEVRRLSADVISRTAFGSNFEEGKRIFSLQEQQTYLFSQAIRSVYIPGFRFLPTKKNRERWSLEKETRELIKVLIETNSKGRENATNLLSMLMSSYKNQNGEEERLGIEDIIDECKTFYFAGMETTAHLLTWALLLLAKHQEWQDKAREEVLKVCGYKKPPAAENLNELKLVGMIINETLRLYSPAVMLTRTASKQLTLGSLDIPAGTELFLALAAVHHDKEFWGEDANCFNPLRFCEPRKHLASFLPFSLGPRICVGQNLALIETKVALAMIIQRFSFAVSPTYTHSPMLFITLQPQFGAQLLFRSLRN* 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36743086 36746485 - CsaV3_3G044960.1 Csa03g04190 525095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04190 501 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 3 494 - -
Csa03g04190 501 Pfam Cytochrome P450 76 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 SUPERFAMILY Cytochrome P450 32 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Csa03g04190 501 Gene3D Cytochrome P450 21 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 494 - -
Csa03g04190 501 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04190 501 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01963 Csa-Chr1:16501446 Csa03g04190 Csa-Chr3:36743086 1.21E-145 dispersed
Csa02g00167 Csa-Chr2:1164961 Csa03g04190 Csa-Chr3:36743086 8.02E-142 dispersed
Csa03g04190 Csa-Chr3:36743086 Csa03g04192 Csa-Chr3:36758169 0 dispersed
Csa05g03102 Csa-Chr5:31027128 Csa03g04190 Csa-Chr3:36743086 6.59E-116 dispersed
Csa03g04190 Csa-Chr3:36743086 Csa03g04191 Csa-Chr3:36748734 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04190 - - csv:101205457 968.763