Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04191 ATGTATATTCTTGCTGTTTCCGTTCTTCTATTTCTCACCATCTTCATCTTTAAATTTGTTTACGCCAATTTTTGGGTTCCATGGAGAATTCAAATCCACTTCCGAAAGCAAGGCATAACAGGGCCTCGCTATTGCCCCATCATCGGTAATGCCACCGATATGCGCCGTATGTATATGGAGGCACAAGCGAAGACAATTCCATTAACCCACGATATATTGTGTCGAGTGCTACCGTATATTCACCAATGGTCAACGGAGTATGGAAAGATGTTTGTATATTGGTTCGGACCCAAGCCGAGACTAGCGATATCTGACCCAGTTATGATTAAGGAAGTGCTTACAAATACAGGTGGGCCTTTTAGAAAGGTGGGATTCACTCCAGTTTCCAAGTTGTTGTTTGGAGAAGGACTTGTCGGACTTGAGGACAAACAATGGGTCATTCATCGAAGAATCGCAAATCAGGCTTTCACCATCGACCGTGTCAAGGGATGGTTACCAGAGATTACCTTAAGTGTTCGTAATGTGTTGGAGAAATGGGAAGAAATGAAGGAAGGTATGGAAGAGTTTGAAGTAGACGTCCATAAACAACTTCGTCTCCTCACAGCAGACGTAATTTCAAGAACAGCATTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAACTTGCAAGAACAACAAATGAATCATTTTCTTCAGGCTGTCTCAAGTGTTTATATTCCTGGCTATAGATTTTTACCTACAAAGATGAACAGAGAGAGGGATAGGCTGGAAAAAGAAACTCGTGCATCAATCAAAGCACTAGTTGAAAGTGAGAAAAACAACAAAGAAAAGGAAAACTCATCTAATCTACTAAGTCTCTTATTGTCGTCGTACAAGAACCAGAATGGGGAAATAGAAAAACTTGGAGTGGATGAAGTCGTAAATGAATGCAAGACATTCTATTTTGCAGGAATGGAAACAACTGCCAATCTATTAACTTGGGCACTTTTATTACTAGCAGAGCATCAAGAATGGCAAGATCGAGCTAGAGAAGAAGTTATCAATGTTTGTGGCCAAAAGACACCACCTACATCTGACAATTTAACTGAACTAAAACTAGTGGGCATGATAATCAACGAAACACTTCGACTTTATCCACCGGCGATTATGATGATGAGGCGGACAATGAAACGACTAACGCTAGGAAACATCGATGTTCCAGAAGGCACACAACTTCAACTTTCGGTGGTTGCAATCCACCATGACAAAGAGCTTTGGGGAGAAGATGCGAGCAACTTCAACCCAATGAGATTTAGTGAGCCTAGGAAGCATCTGGCTTCATTTCTACCATTTGGGTTGGGTCCTAGAATCTGTGTAGGACAACATTTGGCTTTGATTGAGGCCAAAGTTGCGCTGGCTATGATAATTCAACAATTCTCCTTTACAGTTTCTCCAACCTATACACATGCTCCAATGATGTTTGTAAGTTTAAACCCTCAGTTTGGTGTTCAACTCCTGGTTAGGAGCTTATGGAATTGA 1521 41.09 MYILAVSVLLFLTIFIFKFVYANFWVPWRIQIHFRKQGITGPRYCPIIGNATDMRRMYMEAQAKTIPLTHDILCRVLPYIHQWSTEYGKMFVYWFGPKPRLAISDPVMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEDKQWVIHRRIANQAFTIDRVKGWLPEITLSVRNVLEKWEEMKEGMEEFEVDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMNHFLQAVSSVYIPGYRFLPTKMNRERDRLEKETRASIKALVESEKNNKEKENSSNLLSLLLSSYKNQNGEIEKLGVDEVVNECKTFYFAGMETTANLLTWALLLLAEHQEWQDRAREEVINVCGQKTPPTSDNLTELKLVGMIINETLRLYPPAIMMMRRTMKRLTLGNIDVPEGTQLQLSVVAIHHDKELWGEDASNFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQQFSFTVSPTYTHAPMMFVSLNPQFGVQLLVRSLWN* 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36748734 36750652 - CsaV3_3G044970.1 Csa03g04191 525096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04191 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 499 - -
Csa03g04191 506 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 8 499 - -
Csa03g04191 506 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 Pfam Cytochrome P450 80 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Csa03g04191 506 Gene3D Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g04191 506 SUPERFAMILY Cytochrome P450 35 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04191 Csa-Chr3:36748734 Csa04g02242 Csa-Chr4:23069281 6.40E-130 dispersed
Csa03g04190 Csa-Chr3:36743086 Csa03g04191 Csa-Chr3:36748734 0 tandem
Csa03g04191 Csa-Chr3:36748734 Csa03g04192 Csa-Chr3:36758169 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04191 - - csv:101210785 966.066