Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04296 ATGCAAAGCATTTCTTTTTGTGTTTTTTTTGCTTTGGTTTGTGTTACCTTTTTTCTTGTTTCTGAAAATGTAAAAGTAGCTGATGCTGCTGAAGATGCAAGAAATGGTGTTTATATCGTTTACATGGGATCCGCTTCTTCTGGCTTCAGGACTGACTTCCTTCGCCTTCTTAACTCTGTCAACAGACGGAACGCAGTGGTACACACATATAAACATGGGTTCACAGGATTTGCAGCTCATCTATCAGAACATGAAGCCCAAGCCATGAGACAAAGCCCTGGAGTTGTTTCGGTTTTTCCTGATCCATTATTGAAGTTACACACAACTCATTCATGGGATTTCTTGGTCAGTCAGACAAGCGTCAAAATCGACGCCAATCCCAAATCAGATCCCCCAGCCTCTTCCTCTCAACCATACGATACCATTATAGGAATCTTGGACACTGGTATCTGGCCGGAATCGGAGAGTTTTAATGACATGGGTATGGGTCCAATACCTTCGAGGTGGAAAGGTACCTGCATGACAGGCGATGACTTCACTTCCTCCAACTGTAATAGAAAAATCATTGGAGCAAGATTTTACGAAAGTTCTGAGAGTGACGGCATACGGTACCACTCACCTCGAGACGGAGCTGGACATGGCACCCACGTGGCATCAACGGCGGCCGGAAGCGCCGTGGCTAATGCATCGTACTATGGCCTCGCAGCCGGGACGGCCAAGGGCGGCTCCCCCGGCTCAAGGATCGCCATGTACAGAGTCTGCATGGCCGACGGCTGTCGTGGGTCGTCGATCATGAAGGCGTTTGATGATTCCATCGCCGATGGGGTCGATGTATTGTCCTTATCTCTCGGTACACCCTCCGTCTTCCGACCAGATTTGACGGCCGACCCTATTGCCATCGGAGCTTTTCATGCGGTTGAGAAGGGCATTACAGTTGTCTGCTCCGCCGGAAACGACGGTCCCAGTTCTGGAACGGTGGTGAACGACGCGCCGTGGATTCTAACAGTGGCTGCCTCCACCATAGATAGGGATTTTGAGTCTGATGTTGTGCTGGGCAACAAAAAAGTGATCAAGGGCGAAGGTATAAACTTTTCTGATCTTCAAAAGTCTCCTGTATACCCACTAATAGAAGGCAAGTCAGCCAAGAAAGCGAGTGACAGTGAAGACAGTGCAAGGATTTGTTCCGAAGATTCCATGGATGAAGCTCAAGTGAAGGGAAAGATAGTTATTTGCGAAAACAGTGTCGAAGGAGGCGGTTCGGATTGGCAAAGTCAGGCTGAAACAGTGAAGAATCTTGGAGGGGTTGGGCTAGTTTTGATTGATGACGACTCAAAATTAGTTGCAGAGAAGTTTTCTACTCCCATGACAGTTATTAGTAAAAAGGATGGTCTTGAGATCCTCTCCTATGTTAACTCAAGCAGGAAACCAGTTGCTACAGTTCTCCCCACTGAGACCATAATAAACTATAAGCCAGCACCTGCTATAACATATTTTTCATCCAGAGGGCCTAATCCCGCAGTATTAAACATAATCAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCCTGGCTTGGCAATGATTCAAGCTCAACTCCACAAGCAACGAAGTCACCACTCTTCAATGTGATTTCAGGAACTTCAATGTCCTGCCCCCATGTCTCTGGCGTAGTGGCTTCTGTAAAATCTCAAAACCCCACATGGAGTCCCTCAGCAATCAGATCAGCCATCATGACAACAGCAATCCAAACGAATAACTTGGGATCACCAATGACTTTGGATACGGGATCAGTAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACCAATGGAGCATTACAACCAGGACTAGTCTATGAAACTAGTACAACAGACTACTTACTATACCTTTGCGGCCGAGGTTATAATCTAACCACCATTAAGAGCATCACAACTACTATTCCTGATGGATTTGATTGCCCCAAGAATTCAAATGCAGACTACATATCCAACATGAACTATCCAACAATAGCAGTATCTGAATTGAAAGGCAAGGAAAGCAAGAAAGTAATCAGAACAGTTACAAATGTTGGTGGCAATGGTGAAACAGTTTACACAGTCAGTGTAGATGCACCTCAGGAAGTAGAGGTCAAAGTGATTCCGGAGAAATTGAAATTTGCGAAGAACTATGAGAAGCAGAGTTATCAAGTGGTTTTTACCCCAACTGTATCCACAATGAAGAGAGGCTTTGGTTCAATCACTTGGACCAATGGAAAACATCGAGTCCGAAGTCCATTTGTCGTCACTAGTGAGAGTAGTGAGCCATAA 2319 45.75 MQSISFCVFFALVCVTFFLVSENVKVADAAEDARNGVYIVYMGSASSGFRTDFLRLLNSVNRRNAVVHTYKHGFTGFAAHLSEHEAQAMRQSPGVVSVFPDPLLKLHTTHSWDFLVSQTSVKIDANPKSDPPASSSQPYDTIIGILDTGIWPESESFNDMGMGPIPSRWKGTCMTGDDFTSSNCNRKIIGARFYESSESDGIRYHSPRDGAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPGSRIAMYRVCMADGCRGSSIMKAFDDSIADGVDVLSLSLGTPSVFRPDLTADPIAIGAFHAVEKGITVVCSAGNDGPSSGTVVNDAPWILTVAASTIDRDFESDVVLGNKKVIKGEGINFSDLQKSPVYPLIEGKSAKKASDSEDSARICSEDSMDEAQVKGKIVICENSVEGGGSDWQSQAETVKNLGGVGLVLIDDDSKLVAEKFSTPMTVISKKDGLEILSYVNSSRKPVATVLPTETIINYKPAPAITYFSSRGPNPAVLNIIKPDISAPGVNILAAWLGNDSSSTPQATKSPLFNVISGTSMSCPHVSGVVASVKSQNPTWSPSAIRSAIMTTAIQTNNLGSPMTLDTGSVATPYDYGAGEISTNGALQPGLVYETSTTDYLLYLCGRGYNLTTIKSITTTIPDGFDCPKNSNADYISNMNYPTIAVSELKGKESKKVIRTVTNVGGNGETVYTVSVDAPQEVEVKVIPEKLKFAKNYEKQSYQVVFTPTVSTMKRGFGSITWTNGKHRVRSPFVVTSESSEP* 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 37610482 37616661 - CsaV3_3G046020.1 Csa03g04296 525201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04296 772 Pfam Fibronectin type-III domain 668 765 IPR041469 -
Csa03g04296 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 107 IPR037045 -
Csa03g04296 772 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Csa03g04296 772 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Csa03g04296 772 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Csa03g04296 772 SUPERFAMILY Subtilisin-like 139 621 IPR036852 GO:0004252|GO:0006508
Csa03g04296 772 CDD PA_subtilisin_like 348 480 - -
Csa03g04296 772 Pfam Subtilase family 141 588 IPR000209 GO:0006508|GO:0008236
Csa03g04296 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Csa03g04296 772 Pfam PA domain 394 466 IPR003137 -
Csa03g04296 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 52 767 - -
Csa03g04296 772 CDD Peptidases_S8_3 104 584 IPR034197 -
Csa03g04296 772 Gene3D - 342 487 - -
Csa03g04296 772 ProSiteProfiles Serine proteases, subtilase domain profile. 111 617 - -
Csa03g04296 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 52 767 IPR045051 -
Csa03g04296 772 Pfam Peptidase inhibitor I9 37 107 IPR010259 -
Csa03g04296 772 Gene3D Peptidase S8/S53 domain 140 630 IPR036852 GO:0004252|GO:0006508
Csa03g04296 772 ProSitePatterns Serine proteases, subtilase family, histidine active site. 213 223 IPR022398 -
Csa03g04296 772 Gene3D - 634 768 - -
Csa03g04296 772 SUPERFAMILY Protease propeptides/inhibitors 38 103 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04296 Csa-Chr3:37610482 Csa06g02198 Csa-Chr6:19835261 0 dispersed
Csa03g04296 Csa-Chr3:37610482 Csa07g02348 Csa-Chr7:21727193 5.80E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04296 K25898 - csv:101213415 1523.45