Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04402 ATGAAGATCCAATTCTTTCTTTTTCTTCTTCTTCTTCTTCATTCAATTTGCTGTTTTGCTCAGCTTCACCTCAATTTTTATCAAAATTCATGTCCAAATGTTGAGTCCATTGTTAGAGCTGCAGTGAAACAGAAATTTGAACAGACTTTTGTCACTGCCCCTGCCACTCTAAGGCTCTTCTTCCATGACTGTTTTGTTAGGGGTTGTGATGCTTCTGTGTTGATCCAAACAAATAACCACACTTCTGAGAAAGATAATGCAGAGAATCTTTCGCTCGCCGGAGACGGTTTCGACACTGTGATCAAAGCTAAGGCTGCTGTGGATAGCGTGCCAGGATGTAAGAATAAGGTTTCTTGTGCTGACATTTTGGCTTTGGCTACTAGAGATGTTGTAGCTTTGACGGGAGGACCGTCATATGCCGTGGAGTTAGGAAGACGAGATGGGCAAATCTCGACAAGAAAGAGTGTTCGACATCACCTTCCTAAGCCTGATTTTGGATTAAATCAACTCAATGCTATGTTTGCAAAACATGGTCTAACTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATTGGATTCTCACATTGCAAGCACTTCTCCAAAAGGCTATACAGTTTCCACAGCAAAAACAGAATTGACCCGACGTTTAATCCAACGTATGTCGATGAGCTCAAGAGGGAATGCCCGAGAAACGTCGACCAGAGAATTGCGATCGACATGGACTCAACGTCGTCGTTCACATTCGACAACATGTACTTTAAGAATCTGCAGATGGGAAAAGGATTGTTCACCTCAGACCAAGTGTTGTTCACAGATCCAAGATCAAGAAAAACAGTGAACTTATTTGCTTCCAACAATACAGCTTTTGAGCAAGCTTTCGTAGTTGCAATGACAAAGCTTGGGAGAGTTGGAGTCAAAACAAAAAACCAAGGAGAGATCAGAATTGATTGTTCATCAGTGAACTAA 972 41.77 MKIQFFLFLLLLLHSICCFAQLHLNFYQNSCPNVESIVRAAVKQKFEQTFVTAPATLRLFFHDCFVRGCDASVLIQTNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPGCKNKVSCADILALATRDVVALTGGPSYAVELGRRDGQISTRKSVRHHLPKPDFGLNQLNAMFAKHGLTQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPTYVDELKRECPRNVDQRIAIDMDSTSSFTFDNMYFKNLQMGKGLFTSDQVLFTDPRSRKTVNLFASNNTAFEQAFVVAMTKLGRVGVKTKNQGEIRIDCSSVN* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38393105 38395866 - CsaV3_3G047080.1 Csa03g04402 525307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04402 323 Gene3D Peroxidase, domain 2 161 302 - -
Csa03g04402 323 ProSiteProfiles Plant heme peroxidase family profile. 21 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PANTHER PEROXIDASE 3 323 - -
Csa03g04402 323 SUPERFAMILY Heme-dependent peroxidases 21 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 Gene3D - 25 323 - -
Csa03g04402 323 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 Pfam Peroxidase 38 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 PANTHER - 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04402 323 CDD secretory_peroxidase 21 322 IPR033905 GO:0004601|GO:0042744
Csa03g04402 323 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Csa03g04402 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04402 Csa-Chr3:38393105 Csa06g03007 Csa-Chr6:25927418 2.71E-148 dispersed
Csa03g04402 Csa-Chr3:38393105 Csa02g01414 Csa-Chr2:13518309 2.52E-152 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04402 K00430 - csv:101218982 641.728