Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04414 ATGGCACCGAGATTGGGATTTTTGTGTCGGTGGGGTAAAGAGAAAGACCCTCAAAAGGGAACTCCGGTAGTTGTAACAATGGAGAAACCTAACTTCTCCGTCGTGGAGATCGACGGTCCCGACGCTGCATTCCGGCCGGTGGAGAAGAGTAGAGGCAAAAATGCCAAACAGGTTACATGGGTTCTTCTTCTAAAGGCCAATCGAGCCGTCGGTTGCATAACTTGGCTTCTTACTGTTCTTTGGGCATTGTTGGGTACAATCAAGAAGAGGCTGATCTACAGACAAGGAGTCGCCATTGAAGGCGGGAAGTTGGGAAGAGGGAAGTTATTGTTTGGAGTTATTAGAGTTTTCTTAGTAACTTCTATTGCCATTCTTATTTTTGAAATACTTGCTTATTTCAAAGGCTGGCATTATTTCCAGAATTCCAATCTCCATATTCCTCAAGCTTCTGAGTTGCAAGGATTCCTTCATTCACTCTATGTAGCTTGGTTAACTTTTAGAGCAGAGTACATTGCTCCCCTCATTCAAACACTCTCTAAATTTTGCATTGTCTTGTTCCTTATTCAATCAGTGGATCGTATGATTCTCTGTTTCGGTTGCCTGTGGATTAAGTACAAAAGATTTGAACCCAAGATTGAAGGGGATCCCTTTAAGTTGGATGATGTGGAAGGAGCTGGGTACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGGGAGGTTTATGAGCAATCTATCTCTGCAGTCTGTCAAATTGATTGGCCAAGGGACCATTTACTAATTCAAGTTCTTGATGACTCTGATGATGAGAGCATCCAAATGTTAATTAAAGCAGAGGTTGCTAAATGGAGCCAAAAGGGGGTAAACATAGTGTATCGCCATCGATTAGTAAGAACAGGGTATAAAGCAGGGAATCTCAAGTCTGCAATGAGTTGCGATTATGTTAGAGACTATGAGTTTGTCGCAATTTTTGACGCTGACTTTCAACCTAATCCAGATTTTCTTAAACTGACCGTCCCCCATTTCAAGGATAACCCGGAGCTTGGGTTGGTTCAGGCCAGATGGTCTTTCGTGAACACGGACGAAAACTTGTTGACACGCCTTCAAAATATTAACTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTTAATGGGGTGTTCCTTAATTTCTTTGGTTTCAATGGCACTGCTGGTGTTTGGAGGATTAAAGCTTTGGAGGAGTCTGGAGGATGGCTTGAAAGAACCACAGTAGAGGATATGGACATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTTGTATTTCTAAACGACGTTAAGGTCCTTTGTGAAGTTCCTGAGTCCTATGAAGCTTATAGGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTCTTCAGGTTGTGTCTTCCAGCAGTCATAAGTTCTAAGATATCAACATGGAAGAAGGCAAATTTGATACTGTTGTTCTTTCTATTAAGGAAGCTTATCCTTCCATTCTATTCCTTCACTTTGTTCTGCATAATTCTTCCTCTAACCATGTTCGTACCAGAAGCTGAGCTTCCTGTATGGGTGATCTGTTATGTCCCCATTTTCATGTCATTACTCAACATTCTTCCGTCCCCAAAATCTTTTCCTTTTATTGTCCCCTACCTTCTTTTTGAGAACACCATGTCCGTCACCAAATTCAATGCCATGGTATCTGGTTTATTCCAGTTAGGTAGCTCTTATGAGTGGATTGTAACTAAAAAAGCTGGCAGGTCCTCCGAATCCGACTTACTGGCTGCTGCTGAAAGGGACGCTAAGACAATGAATCAAGCACAGATCTATAGAGGTGCTTCCGAGAGTGAGATTTCCGAGTTGGCTCACTTGAAGGAACACAAAGAAGTAGTCTCTGCACCTGTCAAAAAAGTTAACAAGATATATCGGAAAGAGCTAGCTCTCGCGTTTCTTTTGCTCTTAGCCTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTAACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTGA 2088 42.82 MAPRLGFLCRWGKEKDPQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLLTVLWALLGTIKKRLIYRQGVAIEGGKLGRGKLLFGVIRVFLVTSIAILIFEILAYFKGWHYFQNSNLHIPQASELQGFLHSLYVAWLTFRAEYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKYKRFEPKIEGDPFKLDDVEGAGYKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDHLLIQVLDDSDDESIQMLIKAEVAKWSQKGVNIVYRHRLVRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNPELGLVQARWSFVNTDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAVISSKISTWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPIFMSLLNILPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAERDAKTMNQAQIYRGASESEISELAHLKEHKEVVSAPVKKVNKIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS* 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38476463 38482334 - CsaV3_3G047200.1 Csa03g04414 525319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04414 695 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 531 IPR029044 -
Csa03g04414 695 Pfam Glycosyl transferase family group 2 324 537 IPR001173 -
Csa03g04414 695 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 13 695 - -
Csa03g04414 695 PANTHER - 13 695 - -
Csa03g04414 695 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 223 449 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01868 Csa-Chr2:17772506 Csa03g04414 Csa-Chr3:38476463 0 dispersed
Csa03g04414 Csa-Chr3:38476463 Csa05g02920 Csa-Chr5:29658170 0 dispersed
Csa03g04414 Csa-Chr3:38476463 Csa04g02506 Csa-Chr4:24889393 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04414 - - csv:101217415 1363.59