Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04446 ATGGCGAAAGAGAGAGAACTACTCGTTTACTCTGCTAAATTGGCTGAACAAGCTGAGAGATATGAAGAGATGGTTGAGGAAATGAAGAAAATTGCGAAGTTAAATGTGGAATTGACTGTGGAAGAAAGAAATCTGCTATCTGTTGGCTATAAGAATGTAATAGGAGCTAGACGAGCTTCCTGGCGTATTTTGTCTTCAATTGAACAGAAGGAAACTACCAAACATAATGAGAAGAACGTGGAACGGATAATTGGTTACAGGCATGGGGTTGAAGATGAGCTCTCTAAAATATGCAGTAAAATATTGTCAATCATTGACCAGCATCTCCTTCCATGTTCCTCAGCTGGAGAATCTACTGTGTTCTACCATAAGATGAAAGGAGACTACTGTCGGTATTTGGCTGAGTTTAAATCCGGTGATGAGCATAAACAAGTTGCGGATCAGTCATTAAAGTCTTACGAGGCTGCTTCTGCAATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCTCTGAACTTCTCTGTTTTCTACTACGAGATATTGAATTCCCCTGAAAGGGCCTGCCACCTTGCTAAGCAGGCCTTTGATGAGGCTATTGCAGAACTTGACAGTCTCAATGAGGAATCCTACAAGGACATTACCCTTATTATGCAGCTCCTTAGGGACAATCTGACTCTGTGGACATCCGATCTTGCAGATGAAGGAGAGCAGTCCAATGCCGATGAACTTTAG 747 42.03 MAKERELLVYSAKLAEQAERYEEMVEEMKKIAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKETTKHNEKNVERIIGYRHGVEDELSKICSKILSIIDQHLLPCSSAGESTVFYHKMKGDYCRYLAEFKSGDEHKQVADQSLKSYEAASAIANSDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDITLIMQLLRDNLTLWTSDLADEGEQSNADEL* 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38780965 38787852 - CsaV3_3G047520.1 Csa03g04446 525351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04446 248 PIRSF 14-3-3 1 246 IPR000308 -
Csa03g04446 248 Gene3D - 1 247 IPR036815 -
Csa03g04446 248 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Csa03g04446 248 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Csa03g04446 248 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Csa03g04446 248 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Csa03g04446 248 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Csa03g04446 248 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Csa03g04446 248 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Csa03g04446 248 SMART 1433_4 5 246 IPR023410 -
Csa03g04446 248 PANTHER 14-3-3 PROTEIN 3 246 IPR000308 -
Csa03g04446 248 Coils Coil 193 213 - -
Csa03g04446 248 Coils Coil 11 34 - -
Csa03g04446 248 Pfam 14-3-3 protein 12 233 IPR023410 -
Csa03g04446 248 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Csa03g04446 248 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 3 246 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g02151 Csa03g04446 CCT
Csa02g02151 Csa03g04446 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04446 Csa-Chr3:38780965 Csa07g00466 Csa-Chr7:3372382 1.93E-138 dispersed
Csa02g02151 Csa-Chr2:19444483 Csa03g04446 Csa-Chr3:38780965 2.73E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04446 K06630 - csv:101213169 482.641