Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04457 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCTAAGCTTGCCGAGCAAGCTGAGCGTTACGAGGAGATGGTCGAGTTTATGGAGAAGGTTTCCGCCGCTGCAGATGACGAGGAACTCACCGTTGAGGAGCGGAATCTTCTTTCTGTTGCTTACAAGAATGTTATTGGAGCACGTAGAGCTTCTTGGAGGATTATTTCCTCCATTGAACAGAAAGAAGAGAGCCGAGGGAATGATGATCATGTCTCTGTCATCCGTGGTTACAGATCCAAGATCGAGACTGAGCTTTCTAACATTTGTGATGGCATCCTTAAACTTCTTGACTCTCGTCTCATTTCCTCTGCTGCTTCTGGTGATTCCAAGGTTTTTTATCTTAAGATGAAGGGCGATTATCATAGATACCTTGCTGAATTTAAGACCGGAGCTGAAAGGAAGGAAGCTGCCGAAAGTACTCTCACTGCTTATAAATCTGCTCAGGATATTGCAAATTCTGAACTTGCTCCTACTCACCCTATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGCGCTTGCAGCCTTGCTAAACAGGCTTTCGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCAGACATGCAGGACGATGGAGATGAGATTAAAGAAGCAGCTCCCAAACGTGATGATGAATAG 777 45.56 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAAADDEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRGYRSKIETELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE* 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 38853484 38855417 + CsaV3_3G047630.1 Csa03g04457 525362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04457 258 Pfam 14-3-3 protein 14 238 IPR023410 -
Csa03g04457 258 Gene3D - 1 252 IPR036815 -
Csa03g04457 258 PANTHER 14-3-3 PROTEIN 4 253 IPR000308 -
Csa03g04457 258 PIRSF 14-3-3 2 250 IPR000308 -
Csa03g04457 258 Coils Coil 14 41 - -
Csa03g04457 258 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Csa03g04457 258 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Csa03g04457 258 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Csa03g04457 258 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Csa03g04457 258 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Csa03g04457 258 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Csa03g04457 258 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 4 253 - -
Csa03g04457 258 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Csa03g04457 258 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Csa03g04457 258 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Csa03g04457 258 SMART 1433_4 8 250 IPR023410 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g02163 Csa03g04457 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04457 Csa-Chr3:38853484 Csa04g00880 Csa-Chr4:6317654 2.08E-159 dispersed
Csa02g02225 Csa-Chr2:19987096 Csa03g04457 Csa-Chr3:38853484 4.95E-135 transposed
Csa02g02163 Csa-Chr2:19525778 Csa03g04457 Csa-Chr3:38853484 1.82E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04457 K06630 - csv:101210822 502.671