Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04641 ATGGAATTGGAAGTTCAGGGGAAGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCTTTTGTCGAAGATATTGTTCGACGACAAGTTGAGATTGTTGTGCTCAGAGATCCGAATGGCTGCTTCTCTCCTTCGATTGCATTTTCATGATTGCTTTGTTTTGGGATGTGATGCATCGGTTCTTTTAGACAACACTGCCGAGATGAGAGGAGGACCCGAATGGGCAGTGTCATTGGGAAGGAAAGACTCCTTGAAAGCAAGCTTTGATGGTGCCAACAAATACATTCCTTCTCCCAATTCTTCCCTTGAGACCTTAATTGCCAACTTTCAACAACAAGGCCTCAACATTCAAGACTTGGTTGCTCTATCAGGAAGCCACACCATTGGGAAAGCAAGATGCTTGAGTTTTAGACAAAGAGTATATGAAATGAATGGAGGAGAAGAAGAAGAAGATAGATACAAGAGATACAATACATATAAAAGAACTCTAAGGTCAATTTGCCCTATAACAGGACAAGATCAAAGGGTTGCACCCTTAGATTTTAGGACACCAGCAAGATTTGACAACCATTACTTCCTCAACATTCTTGAAGGCAAAGGGCTCTTAGGGTCTGATGATGTGCTCATAACCCAAGATTATGAAGGTGAAATTAGAACACAAGTTAGGAGCTATGCTTCTGATCAAACCCTTTTCTTTGATTCATTTGTTAAGTCCATTGTTAAGATGGGGAATATCAATGTTCTCACTTCTCATGAAGGTGAAGTAAGAAGGAATTGTAGGTTTATCAATCACTAG 798 40.1 MELEVQGKDFWFLTITKKHALLSKILFDDKLRLLCSEIRMAASLLRLHFHDCFVLGCDASVLLDNTAEMRGGPEWAVSLGRKDSLKASFDGANKYIPSPNSSLETLIANFQQQGLNIQDLVALSGSHTIGKARCLSFRQRVYEMNGGEEEEDRYKRYNTYKRTLRSICPITGQDQRVAPLDFRTPARFDNHYFLNILEGKGLLGSDDVLITQDYEGEIRTQVRSYASDQTLFFDSFVKSIVKMGNINVLTSHEGEVRRNCRFINH* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 40327967 40329916 - CsaV3_3G049470.1 Csa03g04641 525546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04641 265 ProSitePatterns Peroxidases proximal heme-ligand signature. 119 129 IPR019793 -
Csa03g04641 265 SUPERFAMILY Heme-dependent peroxidases 19 264 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 PRINTS Haem peroxidase superfamily signature 41 55 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 PRINTS Haem peroxidase superfamily signature 119 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 ProSiteProfiles Plant heme peroxidase family profile. 36 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 PANTHER PEROXIDASE 20 68 264 - -
Csa03g04641 265 Gene3D Peroxidase, domain 2 97 244 - -
Csa03g04641 265 Pfam Peroxidase 36 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 Pfam Peroxidase 68 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 PANTHER PEROXIDASE 72-RELATED 68 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 PANTHER PEROXIDASE 20 34 69 - -
Csa03g04641 265 Gene3D - 22 68 - -
Csa03g04641 265 PRINTS Plant peroxidase signature 43 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 PRINTS Plant peroxidase signature 238 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 PANTHER PEROXIDASE 72-RELATED 34 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g04641 265 Gene3D - 69 264 - -
Csa03g04641 265 ProSitePatterns Peroxidases active site signature. 41 52 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04641 Csa-Chr3:40327967 Csa06g03285 Csa-Chr6:27565675 6.20E-70 dispersed
Csa03g04641 Csa-Chr3:40327967 Csa04g00543 Csa-Chr4:3606838 6.78E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04641 K00430 - csv:116402797 436.032