Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04662 ATGTTGGAGGATCAAGTGGCGTACTTATTGCAGAGGTACCTTGGAAATTATGTACGAGGACTCAATAAGGAGGCTCTGAAGATCAGTGTGTGGCAAGGTGATGTTGAGCTAACAAACATGCAGCTGAAGCCAGAGGCACTCAATGCATTGAAGTTGCCAGTGAAAGTTAAAGCCGGCTTTCTTGGATCAGTCAAAATTAAGGTTCCATGGAGCAGACTTGGTCAAGATCCTGTCATAGTGTATTTAGATCGAATTTTCTTATTAGCTGAGCCTGCTACGGAAGTTGAAGGACACAGTGAAGATGGTATCCAAGAGGTCAAGAAAACTAGAGTTCGTGAAATGGAAATGAAGCTCTTAGAGAGGATGCAGCGAACAAAGACAGAAATGAATAATTCGTGGTTGGGATCACTGGTCAGCACTATAATTGGAAATTTAAAGCTTTCCATATCAAATATTCACATCAGATACGAGGATATTGAAAGCAATCCTGGACATCCATTTGCAGCTGGTGTAAGTTTAGAAAAACTTTCAGCTGTCACAGTAGATGATGATGGGAAGGAGACTTTTATAACTGGTGGTGCACTGGATCGCATTCAGAAGTTTGTTGAACTCAACCAGTTAGCAGTCTACCTTGATTGTGATATATCTCCTTGGTATCTAGATAAACCGTGGGAGGATTTACATCCATCAGAGTGGGACAAAGTATTTCGCTTTGGTACCAAAAATGGGAAACCGGCTGAAGGGCTTACGAAGAAGCATGGCTATATCTTGCAACCAGTGTCTGGATATGCAAGGTATACAAAGTTGCGGGAAAATGATCTTGCAGATAGCCATGAACCTCTACAGAAAGCATCAGTATATTTGGATGACGTGACACTTTGTTTGTCAAAGAATGGGTATAGGGATATTCTAAAGTTAATCGATAATTTTGCTGCATTCAATCAGCGATTGAAGTACGCTCATTATCGACCTCGTGTTTCTGTGAAAACTGATCCTAGTTCCTGGTGGAAGTATGCTTTTAATTCAATTTCTGACCAGTTGAAGAAGGGAAGTGGAAAAATGTCATGGGAGCAGGTTCTGAAGTTTGCCAACTTACGCAAGAGATATATCTCTTTGTATGCTTCGTTGCTTAAATCTGATCCTACTCGTGCAATTGTTAACGATGACAAACATATTGAGGAACTTGACCGTGAACTGGATATTGAGCTGATTCTCCAATGGAGGATGCTCGCTCACAAGTTTGTTCAAAAGTCAGTGGAATCTGACCAGTACTTGAAGAAAGCAAAAGTGAAAAAATCTTGGTGGCCATTTGGATGGAACAATCAATCATTCAAAGATGAAGAAGAACAATTCTTTAGTCAAGAAGACTGGGAACAACTGAACAAATTTATAGGGTACAAGGAAGATGACAATTCACTGTCCATCATAAATGTTGGCAAAGTGGACACTCTTCTTACTTCTTTGGAGGTTCACATGAACCGTAATGCTTCAAAGCTTACCGATGAGGCCCAACATTGTCTTGCTGAACTCTCATGTGAAGACCTTAACTGTTCCATAAAATTTTTTCCAGAAACCAAAGTTTTTCACATCAATTTGGGGTCATATCAACTATCATCTCCAAGCGGTCTCCTTGCTGTGAGTGCTGCTGTTCGTGATTCGTTGGTTGGTGTCTTCCATTACAAGCCTTTTGATGCCAAAGTGGACTGGAGCTTGGTTGTGAAGGCTTCTCCTTGTTATGTGACTTATCTCAAAGATGCTATCGAACAAATTATGAGCTTCTTTGAGAGCAGCACCGCTGTTGGTCAGACTGTGGCATTGGAAACAGCTGCTGCGTTACAGTTGACAATTGATGAAGTTAAGCGTAGTGCTCAGCACCAAGTGAGTAGAGCATTGAAAGATCGTTCGAGGTTTCTGCTGGACTTGGATATTGCAGCTCCTAAGATTACAATTCCTGCGGAGTTTCATCTTGATGATATCAATTCGATAAAGCTTCTGATTGATTTGGGTAATTTGCTGATACGAACACAGGATGACCAAGAAAACGTGTCTTCTCAAGAGTTGGATATGTATTTGCAATTTGATGTGGTCTTGAGTGACGTCTCTGCCTTTCTGGTTGATGGGGATTACAACTGGAATCAAATTTTTGGCAAAGATACTCACAAATCTCCTCGTGTAACAGACATCAACATCATGCCCGTTATTGATAAATGTGGGATTATCTTAAAACTGCAACAGATTCGGTTGGAGAATCCGTCTTACCCTTCAACAAGACTTGCAGTGCGATTGCCTTCCTTAGGGTTTCACTTTTCGCCAGCAAGGTATCATCGACTGTTAAAAATTCTGAAGATTTTCCAGGAGGATAGTACCAATTCAGATGTTCCTCAACTATGGAATCAAGCTGACTTTGAGGGGTGGCTATCTGTTCTTATTAGGAAGGGTGTTGGAAACAGGGAGGCTGAATGGCAACGGCGATATTGTTGTCTAGTAGGGCCCTATCTCTACTTAATTGAAAGCCCGGGGTCCAAGTCTTACAATCAATATCTCAGCTTAAGAGGAAAACAAACCATTCAACTGCCGGCAGAGTTGGTTGGAGAGGTGCAACATGTTTTGGCTGTTTACGATGCTTCACGATCAAATAACAAGATTGTGGAGGATACTAGTGCCCTCATATTGAGGTTTGATTCTGATGACTCAAGGAAAATTTGGCAGAACCGCTTGCAAGGAGCCATATATCGTGCTTCGGCCTCTGCTCCTATTTTGGGTCTATCTGAAACTTCCTCAAACTCTGAGGACTCTGAAATTGAACCGGATGAAAGTGATGGTACCATGGATTCATCTATAGAGAGGGTATTTTTGACTGGTTCTCTTGATGAACTTAAAGTCTGTTTCAGTTCTAGTAATCAGCATGGGCAAAACTTTGAGAAGATCCTTCTTGCAGAAGAAAGAAATTTGATTGAGTTCCGGGCAATTGGTGGTCAGGTCGAGCTGTCAATGAGATCAAATGACATGTTCATTGGCACTATACTGAAGTCTTTGGAAATTGAAGACTTAGTTTGTTCGAAGACCAATTCTCGATCTTGTTATTTGGCAAGATCATTTGTTCATGGGGAAGAGACACCTTTGTTTTCTGATTACTTAAACAACCATGGTTCTGATAACAATGATTTAACTCAAGTAGAAGGTGATGATAAATTCTTTGAGGCACCCGAAACCTTGGTTGACTATGCTGATTATCAGATACAATCACCCAGAAAAGGTCTTGAGTATGTAAAATCTCAAAGTTCGCTCCAATTGAAAAATTTTGCTCTCCCCAGCTTTTCACGTATTGCTGGTCTGCTTCCACCTGGTGGCTCTGAAACTCATAGTGTGGATAATGAGCAATCTGTTACATTAGATAGTTTTATAAAAGCTCAAATAGCTCTTTATGACCAAAATTCTCCTCGATACTATGATGTAGACAAACAGGTTTCTGTTACCTTGGCTACATTGTCATTTTTCTGTCGTAGACCTACAGTTTTAGCCCTTATTGAGTTTGCCAATGCCATTAACTTGGAGGAAGAAAGCTGTGAATCATTCAGTGATCACTCATCATCAGGTATCGTAAAGCATGATATCCAAATTGAAGATGAAGAACAGTTTCCAAAGAACACGGAGGATGGCATTGTGAAAGGTTTGCTAGGAAAAGGGAAGTCTAGAGTTGTATTCAATTTAGAATTGAAGATGTCTCGTGCACAAATTTTTCTAGTGAAGGAAAATGAAAGTAATCTAGCAAGTTTGTTTCAGGACAACTTGCTTGCTAATATCAAGGTGTTCCCGTCCTCTTTTAGTATAGAAGCTGCTCTTGGAAATCTGAGGATAAGTGATGATAGTCTTTCAAGCAGCCACATGTACTATTGGGCATGTGATATGAGGAATCCTGGTGGCAGTTCTTTTGTTGAGCTATTCTTTTCTTCATTCAATGTTGATGATGAAGATTACAACGGTTATGAATACAGTCTTCTGGGGAAGCTTTCAGAAGTACGCATTGTATATTTGAATCGATTTGTCCAGGAGGTTGTTAGTTACTTTGTGGGTCTCGTCCCTGAAAATGCTGAGGGTGTTGTGAAGTTAAAAGATCAAGTAACGAATTCAGAGAAGTGGTTTACCACTACTGAAATAGAAGGTTCGCCTGCTTTGAAGTTGGATCTTTCACTTTCAAAGCCTATAATATTAATGCCCCGAAGAACAGACAGTCTTGATTATTTGAAGCTTGATATTGTCCATATTACCATTCAGAACACATTTCAGTGGATTTCTGGGAGTAAAACAGACATGAGCGCTGTGCATTTGGAAACTTTAACTGTTCTGATTGATGACATCAATTTAAATGTTGCCGTGGGAGCGGAACTAGGGGACAGCATAATTGAAGATGTCAAGGGGGTTTCAGTGATCATCCGTAGGTCACTTCGGGATTTGTTGCGTCAAATACCAAGTTTGGAAGTTGGAATTCAGATAGGAGTGTTGAAAGCAGTTCTTTCAAACAAAGAGTACCAGATCATCACTGAATGTGCAATGTCAAATATCTCTGAGACAGCAAATGTTGTCCCCCCATTGAAAAATATTTCTTCTGCTTCAACTGATATAATAGAACCTGATACTCGCCAGGTTCTAAATGGGACAGAACCTGAAACAAGTGAACCATTCTCAGTGTCAATGAAACTCTCCGTTATTATTGACCTGGTTCAGTTGTGCTTGCGTGCAGGAATATCCGGAGATGCATCTTTAGCCACTGTGCAGGCTAGTAATGCATGGGTATTGTACAACTCCAATACAAATGGTGAAGGTTTTCTTTCAGCAACACTCAAGGGTTTCACTGTTCTTGATGACCGTGAGGGAACTGAACTGGAATTCAGGCGGGCAATTGGAGTTGCTAACAGCATTGGTACAGCTTGGCTGCACATACCGACTGATAAGCACAATCAACTTTCAAGTGATGCAAGTACCATAAAAGAAAATATTTCTCAAGCAGTTCCTGCAATGCTTATTCTTGATGCAAAATTCACACAGTGGTCAACATTTGTTTCATTATCAGTTCAAAAACCTCAACTTCTTGTCGCGCTTGATTTTCTCCTGGCCGTTGTTGAATTTTTTGTTCCAACTGTTGGCAATATATTGTCAGATGAAGAAGATAAGAGCTACTTACATGTTACTGATGCTGTTATCTTGGATCAGTCACCTTATAGGCAGCTATCATCCAAACTGCATATATCCCCAGGAAAACCGTTAGTAGCTGATGATGAAAATTTTGATTATTTCATCTATGACGGTAATGGTGGAGTAATGCATTTAACGGATAGAAACGGAGTTGATCTTTCAGCACCTAGCAAGGAGGCAATGATATATGTTGCAAATGGGAAGAAATTGCAGTTCAAAAACATCACTATCAAAGGTGGACAATTTTTGGATTCCTGTGTTTTTATGGGTACCAACAGCAGTTATTCAGCATCTAAGGAAGATAAGGTGTACTTGGAGTTGGGGGATAATGTTGTCCAACGAAGCTCTCAAGATGTACAACCTCAAGATATTACCAGCAACAAGTCTACTGAGTATACTATTGAATTGCAGGCAATTGGTCCTGAGCTGATTTTCTACAACACATCAAGGGAAGTAGGGGAATCAACAATCCTCCAGAACCAACTTTTGCATGCTCAACTGGATGTATATTGCAGGCTTCTTCTGAAAGGTGATACAACTGAGTTTAGTGCAAATGCACTCGGTTTGACCATGGAGAGTAATGGAATCCGGATTCTGGAGCCGTTTGATTCCTCAGTAAATTATTCAAATGCTTCTGGAAAGACGAATATACATTTATCTGTTTCAGATATATTTATGAACTTTTCATTCAGCATCTTGAGGTTGTTTTTAGCCGTTGAAGAGGACATTGTGGCATTTCTAAGAATGACATCGAAGAAAATGACTGTAGTATGCTCCGAGTTTGACAAAGTCGGAACAATCAAAAGTCTGAACAGTGATCAAGTATATTCTTTTTGGAGGCCTAATGCTCCACCTGGTTTTGCCGTATTTGGTGACTATGTTACACCATCTGAAAAACCACCAACGAAAGGAGTTCTTGCAGTAAATACCAACTTTGCAAGACTAAAGCGACCTGTATCTTTCAGACTAATATGGCCACCGGTAGCTTCTCAAGACATTTCTAGTTATCACATCGACAATTATGATTCATCACCTGGTGATGATAGTCTGGGACAAGAGGATTGCTTTTATTCCATTTGGTTTCCTGAAGCACCCAAAGGATATGTTGCACTTGGTTGTGTTGTCTCCAAAGGAATTACGCAACCGCCAGTATCTGCTGTTTTCTGCATCGCCTCTTCCTTAGTTTCTGCTTGTTCCTTGAGGGACTGTATAAGTATCAGCACCAGTGTACCGTGCCATTCAGATTTTGCTTTATGGCGTGTGGACAATGCTGCTGGATCTTTCTTGCCAGCAGATCCAACAACTTTTAGTGTGAGAGGTACTGCATACGAACTGCGTCACACAATTTTTGGGTTTCCTGAAGTGTCTCATGAAGTGCCTAAGAGTTCAGATAGTCATGCTTCACCTAGTCAAACTGAGACTTCACATTTGGAGAAATCACCTATAGTAACTTCTGGTCAGCGTTTTGAGGCTGTTGCTAACTTTCAGTTGATATGGTGGAATCGAGGATCAAATTCCAAGAAGAAACTATCAATATGGCGTCCAGTTGTTCCTCAGGGGAAGATTTATTTTGGTGATGTTGCTATTAAAGGATTTGAGCCTCCAAATACGTCTATTGTTCTTCATCATACTGGAGATGAAGAGTTGTACAAGTCTCCACTAGATTTCCAACTTGTGGGACAAATCAAGAATCAAAGAGGAATGGAAGACATATCTTTCTGGTTGCCACAAGCTCCTGCAGGTTTTGTTTCCTTGGGTTGTATTGCATGCAAACATAAGCCTAAGCTACAAGACTTCAGTGCATTGGGATGCATGCGGATGGATATGGTAACATGGGATCAGCTCATGGAGGAAAGTGCCTGGGATTCTTCAGATGCTAAGCTAATAACTGAGCCATTCAGCTTATGGATAGTTGGTATTGAGTTGGGGACATTCGTTGTGCAGAGTGGGTCTAAGAGGCCTCAAAGGAGCTTCAATCTTAAGCTGGCAGACTCACATGTAACAAGTGGTTCAGATAACACTGTAATTGATGCAGAAGTGAGAACGCTTTCTATAGCGGTGTTTGATGACTATGCTGGTTTGATGGTTCCATTGTTCAATATATCACTTAGCGGGCTGGGATTTAGTCTTCATGGAAGAAAGGGATATTTAAATTCCGTCGTGAACTTCTTTTTGGCTGCCAGATCATATAATGATAAGTACGAATCTTGGGAGCCACTTGTTGAACCTGTAGATGGATTTCTGAGGTACCACTACGATCAAAATGCCCCTGGATCAGCTTCTCAGTTGCATCTTACCACAGCTAGGGATTTAAATTTGAATATTTCAGCATCTAGCATCAATATGCTTATTCAAGCATATGCAAGCTGGATCAACCTCACGCATGTTGAGGAGCATAATAAAACAAGAGACTCGTTGTTTTCCACTTCTGGTGGAAAAAGTATCGGTGATGTGCATGCCAAGAGAGACTATTTCATCATCCCACAAAACAAACTTGGGCAGGACATTTACATCCGAGCTTCAGAAATACGTGGTCTTCAAAATGTAATTAGGATGCCTTCAGGGGACATGAAGCCCCTAAAAGTTCCTGTTTCAAAGAACATGTTAAATTCCCATTTGGAAGGAAAACGTTTTAAGAAGGATAGGAGAATGGTGACGATAATAATTTCTGATGGACAGTTGCCAAGGGTTGAAGGACCAGCTGTTCACCAATATACTGTTGCTGTTCGTCTTACTCCCATACAAGGAGTTTCTACTGAATTACAACATCAACAGAGTGCACGAACATCCAGAAGTAGCTCGGACCACTCATTATCCGCTGAGGTTGACTTAGTTCACTGGAACGAAATATTCTTTTTCAAAGTTGAAACACCGGAAAAGTATATGCTGGAGTTGATGGTAACAGATGTTGGAAAAGGGGATGCTACTGGATTCTTTTCTGCTCCTTTAACACAGATAGCACAGATCTTGGAGGATGAATTTCATTTGCATGATCACGTGAATAGGATAAGCAGTATTGAACTTGCTCCACCAGAATTGGGGAAAACAGGCAAGTCCAGTGGAAGATTAAATTGTACTGTTCTTTTGTCGCCCAAACCAGAATTTGAGAACATTAATCAATCTCAAAAGAGAGGAAGAAAATCTGGTTCTATTCAAATAAGTCCGACCAGGACTGGCCCTTGGACTACTGTTAGGTTAAACTATGCTACACCAGCTGCCTGTTGGCGCTTGGGGAATGATGTAATCGCCAGCCAAGTGACTGTCAAGGATAGCAGCCGATATGTGACAATAAGGTCTCTCGTCTCAGTGCAGAACAATACTGATTTTATACTTGATGTATGCCTCATGTCCAAACATTACAAGGAAGGCATACATCTCCTGAATGAAACTGGTAATTCTGATGGTTCAACCACCGAGAGTAACATGGTTGTCATAGAAGAGTTCTATGAAACCGAAAAGTACATCCCCACTGCTGGCTGGGTTAGCTGCCTGAAACTCAGTCAGGATTTTTCAGAAGGAATTATCCCGGAGTTAACATCAAGAGTTGAGCTACCGTCAGGTTGGGAATGGATTGATGATTGGCATTTGGACAAGACATCTCAAACTGCTGATGATGGTTGGGTTTATGCTCCAGATGTCAAAAGTTTAAAATGGCCTGATTCCTCCGACTCAAAATCTGTAAACCATGCAAGGCAAAGGAGGTGGGTCAGAAATAGGAGACAGATCGTAAACAATATAAAGAAGGAAGTATTCATAGGGCAGTTGAAGCCAGGTGATACAGTTCCTCTACCTTTATCGGTGCTGAAACATTCTGGACTTTATATCTTTCATTTTAGGCCTTCGACTCTTAATAATTGTGATGAGTACTCTTGGAGTTCAGTTGTAGATAAACCAAATAAAGAGGATGTTAATGGGCCTCATATTTTTTCTGAAATATGTATTTCAACCCTAAGTGAATCTGAGGAGTTGTTGTATTGTGCTCAGACAAGCGGAACGTCGTCAAGTAGTACCCATATGTTATGGTTTTGCTTAGGCATACGAGCATTGGAAATTGCCAAAGATATACACTCTGACCCTATTCAGGACTGGAATCTTGTTATCAAGGCTCCATTATCTATTGCCAATTACCTTCCACTTGTTACAGAATTTTCTGTTCTAGAGAAACAGAAAAGTGGCCATTTCATTGATTGCTGCAGAGCAATCCTTCATCCAGGGAAAACTGTGAAGGTCTACGATGCTGATATCAGAAATCCATTGTTCTTTTCACTCTTCCCACAGAGGGGATGGCTTCCTGTACATGAAGCAGTTCTTATATCCCATCCTCATGGAGTTCCATCAAGAACATTAAGTTTGAGAAGTTCAATTACTGGAAGGGTTGTTCAAGTTATTCTTGAACAAAATCATAATAAGGAACATCCATTTCTGGAGAAGATCATCAGATTCTATGCGCCCTACTGGTTTTCTATTTCTAGATGCCCTCCTCTCACACTCCATCTTGTAGACAGATCAGGGAGAAAAAAATCGCGAAAGATTTATCACCGGTTTAAGTCCAACACTAATACCGACATATTTGAGGAAATAACTGAAGAAGAAATACACGAAGGCTACACAATCGCTTCTGCTCTGAACTTCAATTCGTTGGGCCTCTCTGTGTCAATTAATCAATCTGGGACAAACAAATGTGTAACTGTCGAAGATCTATCTCCTCTTGGCGACATGGATGGATCCTTAGATCTCTATGCTTGTGATGATGATGAGGGAAAGCGTATGCAGCTTTTCATTTCAACAAAACCATGTCCCTATCAATCTGTACCAACCAAGGTGATTTTAGTTCGTCCATTCATGACCTTTACCAATCGGCTTGGTCATGACATCTTCATTAAGTTAAGCGACGAAGATGAACCAAAAGTTCTTCATCCGCATGATTCAAGAGTTTCGTTTGCATTTCAGAAAACTGGTGGACATGATAAACTCCAGGTACGTTTAGAAGATACCAGTTGGTCACTTCCTCTTCAAATTATGAAGGAAGATACAATATTTTTGGTCTTGAGGAGATATGATGGTATCCGTAGATTTCTGAGGATGGAAATTCGTGGCTATGAAGAAGGATCACGTTTTATCATTGTGTTTCGTGTAGGATCCGCAGATGGCCCAATCAGGGTTGAGAACAGAACCGACAATACAATCAGCTTACGTCAGAGTGGGTTTGGTGAAGAGGCTTGGATTATATTGCCACCCCTTTCAACTACAAATTTTTGTTGGGAGGATCCATACAATCAACACTTAATAGATACTAAAATTAGTAGTGATGGTAGTATTGGAGTTTGGAAACTTAATACAAGCACTGGATTATGTTCTTTAGAGGATGGTGAAACACAATTATGTTGCTATGTGGCGAAAGAAGGTGATATTAAAGTAATTAGATTCAGAGACAGTCAACATTTCGAATCTGACTTTCATGAAGAGATTGGATACTTAACAGCAGCAAGAAATTGGAGGTCTCAAATGCAGAAACCGGTGCAGGATAGTGAAGCAGCACCTACTGAGCTGATAGTTGAGTTAGGAGTTGTGGGCATTTCTGTTATAGACCACAGGCCAAAAGAGCTGGCTTATATGTACTTGGAGAGAGTTTTTATCGCATATTCAACTGGATTTGATGGTGGAACAACAAATAGGTTCGAGATTATTTTTGGTAATTTGCAGTTTGATAATCAACTCCCCCTGACATTGATGCCAGTGCTGTTGGCTCCTGAGCAGACCACAGATATAAATCACCCAGCATTTCGAATGACAATAGAAATGCAGAATGAGAATATTGTTGGAATCCGAGTCTTCCCGTACATTTGTGTTCAGGTCACAGAGAAATCTTGGAGGCTTAACATACACGAACCACTCATTTGGGCTGTTGTTGAGTTGTATAATAATCTTCAGCTAGGTCGTTTACCCCAAAGTTCTAGTATCACCCAAGTTGATCCGGAAATACGTATTAACCTAATAGATATTTCTGAAGTGAAGCTGAAAGTTGTTCTGGAGCCAGCACCAGCACAAAGACCCCATGGAGTTTTAGGTATCTGGAGCCCCATACTGTCAGCTGTAGGAAATGCATTCAAGATACAGGTCCATCTAAGAAGAGTGATGCACAAGGATAGATACATGCGTGAAAGTTCAATTCTTCCTGCTATTGGAAACCGTATCTGGAGGGACTTTATTCATAATCCTTTACACCTAATATTTTCATTAGATGTACTTGGCATGGCAAGTTCAACATTGGCTTCGCTTAGCAAAGGGTTTGCCGAACTTTCAACTGATGGCCAGTTTTTGCAATTACGGTCAAAGCAGGTATGGTCACGGAGAATTACTGGTGTACGTGATGGTATAATCCAAGGCACAGAAGCTCTTGCTCAGGGTGTTGCTTTTGGGGTGTCAGGCGTGGTAACAAAGCCTGTGGAAAGTGCTAGACAAAATGGTTTACTTGGTCTGGCTCATGGATTAGGACGTGCGTTTCTTGGATTTATTGTACAACCTGTAAGTGGAGCATTAGATTTTTTCTCATTGACTGTTGATGGAATTGGTGCAAGTTGTTCCAAGTGTTTAGAGGTTTTCAACAAGAAGGTTCCTTTCCAAAGAGTTAGAAACCCTCGGGCCATCCATGCTGACAGTATTCTTAGAGAGTACTGTGAGAGAGAAGCTATTGGCCAGATGGTTCTTCATCTTGCGGAAGGAAGTACACATTTTGGGTGTACTGAAATCTTCAAGGAGCCTTCAAAATTTGCATTTTCTGATTATTATGAAGAACACTTTATTGTACCATACCAAAGAATTGTTTTGGTGACCAACAAGAGAGTCATGCTGCTACAGTGCTCAGATCCAGGAAAATTGGATAAGAAACCCTGCAAGATTCTGTGGGACGTTCCATGGGAGGAGCTCATGGCACTGGAGTTGGCAAAAGTGGCTAACAGTCAGCCTTCTCACTTAATCATCCATTTAAGAAGTTTCAAGAGGACAGAAAACTTTGCACGGGTTATAAAGTGTCATATTGAAGAAATTTTGGGAAGAGAACCTCAAGCTGTTAGGATTTGTTCGGTGGTGAGTAAATTGTTCAAAGAGTATCAATCTGACATGAAATGCCTTGAACTGAAGGTTCCCTCGAGCCAGAGGCATGTTTATTTTTCCTGCAGTGAAGCTGATGGGAGAGATGCAAATATTTTAAATAAATCTATTATTAGATCGAGGGAGCTTCTGTCATCCAGTTTCTCAAATGATGAGGGAAGATTTGTGCAACACAGTATGAACTTTACAAAGGTTTGGAGCAGTGACCTAGAGTTAAGAGGTCGTTGCATATTGTGCAAAAAGCAGGCCCTGGAAGCAGGAGGGATATGTACCATATGGAGACCAATATGTCCCGACGGATACATCTCCATTGGGGATATAGCTCATCTCGGCAGCCATCCTCCGAATGTTGCTGCTATCTACCGGCACGTGGAGGGAATGTTTGTACCGCCAGTAGGTTATGATTTGGTATGGAGAAACTGCCAAGACGACTACATAACTCCTGTATCAATCTGGCATCCAAGGGCCCCAGAAGGCTTTGTTGCTCCAGGATGTGTCGCAGTTGCAGATTTTGCTGAGCCAGAGCCTAACTTGGTTTATTGTGTGGCTGAATCCCTTGCTGAGGAGACAGTATTTGAGGAGCAGAAGATTTGGTCAGCACCAGATGCATACCCTTGGGCATGTCATATCTACCAAATTCAAAGTCATGCGCTTCATTTCGTAGCTCTCAGACAAAGCAAGGAAGAATCCGATTGGAAGCCTATGAGAGTTATAGATAAACCCCCCAGTCCGTCACCAACTTCAGGAAATCACTGA 13059 41.01 MLEDQVAYLLQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVPWSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEMKLLERMQRTKTEMNNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKFVELNQLAVYLDCDISPWYLDKPWEDLHPSEWDKVFRFGTKNGKPAEGLTKKHGYILQPVSGYARYTKLRENDLADSHEPLQKASVYLDDVTLCLSKNGYRDILKLIDNFAAFNQRLKYAHYRPRVSVKTDPSSWWKYAFNSISDQLKKGSGKMSWEQVLKFANLRKRYISLYASLLKSDPTRAIVNDDKHIEELDRELDIELILQWRMLAHKFVQKSVESDQYLKKAKVKKSWWPFGWNNQSFKDEEEQFFSQEDWEQLNKFIGYKEDDNSLSIINVGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSIKFFPETKVFHINLGSYQLSSPSGLLAVSAAVRDSLVGVFHYKPFDAKVDWSLVVKASPCYVTYLKDAIEQIMSFFESSTAVGQTVALETAAALQLTIDEVKRSAQHQVSRALKDRSRFLLDLDIAAPKITIPAEFHLDDINSIKLLIDLGNLLIRTQDDQENVSSQELDMYLQFDVVLSDVSAFLVDGDYNWNQIFGKDTHKSPRVTDINIMPVIDKCGIILKLQQIRLENPSYPSTRLAVRLPSLGFHFSPARYHRLLKILKIFQEDSTNSDVPQLWNQADFEGWLSVLIRKGVGNREAEWQRRYCCLVGPYLYLIESPGSKSYNQYLSLRGKQTIQLPAELVGEVQHVLAVYDASRSNNKIVEDTSALILRFDSDDSRKIWQNRLQGAIYRASASAPILGLSETSSNSEDSEIEPDESDGTMDSSIERVFLTGSLDELKVCFSSSNQHGQNFEKILLAEERNLIEFRAIGGQVELSMRSNDMFIGTILKSLEIEDLVCSKTNSRSCYLARSFVHGEETPLFSDYLNNHGSDNNDLTQVEGDDKFFEAPETLVDYADYQIQSPRKGLEYVKSQSSLQLKNFALPSFSRIAGLLPPGGSETHSVDNEQSVTLDSFIKAQIALYDQNSPRYYDVDKQVSVTLATLSFFCRRPTVLALIEFANAINLEEESCESFSDHSSSGIVKHDIQIEDEEQFPKNTEDGIVKGLLGKGKSRVVFNLELKMSRAQIFLVKENESNLASLFQDNLLANIKVFPSSFSIEAALGNLRISDDSLSSSHMYYWACDMRNPGGSSFVELFFSSFNVDDEDYNGYEYSLLGKLSEVRIVYLNRFVQEVVSYFVGLVPENAEGVVKLKDQVTNSEKWFTTTEIEGSPALKLDLSLSKPIILMPRRTDSLDYLKLDIVHITIQNTFQWISGSKTDMSAVHLETLTVLIDDINLNVAVGAELGDSIIEDVKGVSVIIRRSLRDLLRQIPSLEVGIQIGVLKAVLSNKEYQIITECAMSNISETANVVPPLKNISSASTDIIEPDTRQVLNGTEPETSEPFSVSMKLSVIIDLVQLCLRAGISGDASLATVQASNAWVLYNSNTNGEGFLSATLKGFTVLDDREGTELEFRRAIGVANSIGTAWLHIPTDKHNQLSSDASTIKENISQAVPAMLILDAKFTQWSTFVSLSVQKPQLLVALDFLLAVVEFFVPTVGNILSDEEDKSYLHVTDAVILDQSPYRQLSSKLHISPGKPLVADDENFDYFIYDGNGGVMHLTDRNGVDLSAPSKEAMIYVANGKKLQFKNITIKGGQFLDSCVFMGTNSSYSASKEDKVYLELGDNVVQRSSQDVQPQDITSNKSTEYTIELQAIGPELIFYNTSREVGESTILQNQLLHAQLDVYCRLLLKGDTTEFSANALGLTMESNGIRILEPFDSSVNYSNASGKTNIHLSVSDIFMNFSFSILRLFLAVEEDIVAFLRMTSKKMTVVCSEFDKVGTIKSLNSDQVYSFWRPNAPPGFAVFGDYVTPSEKPPTKGVLAVNTNFARLKRPVSFRLIWPPVASQDISSYHIDNYDSSPGDDSLGQEDCFYSIWFPEAPKGYVALGCVVSKGITQPPVSAVFCIASSLVSACSLRDCISISTSVPCHSDFALWRVDNAAGSFLPADPTTFSVRGTAYELRHTIFGFPEVSHEVPKSSDSHASPSQTETSHLEKSPIVTSGQRFEAVANFQLIWWNRGSNSKKKLSIWRPVVPQGKIYFGDVAIKGFEPPNTSIVLHHTGDEELYKSPLDFQLVGQIKNQRGMEDISFWLPQAPAGFVSLGCIACKHKPKLQDFSALGCMRMDMVTWDQLMEESAWDSSDAKLITEPFSLWIVGIELGTFVVQSGSKRPQRSFNLKLADSHVTSGSDNTVIDAEVRTLSIAVFDDYAGLMVPLFNISLSGLGFSLHGRKGYLNSVVNFFLAARSYNDKYESWEPLVEPVDGFLRYHYDQNAPGSASQLHLTTARDLNLNISASSINMLIQAYASWINLTHVEEHNKTRDSLFSTSGGKSIGDVHAKRDYFIIPQNKLGQDIYIRASEIRGLQNVIRMPSGDMKPLKVPVSKNMLNSHLEGKRFKKDRRMVTIIISDGQLPRVEGPAVHQYTVAVRLTPIQGVSTELQHQQSARTSRSSSDHSLSAEVDLVHWNEIFFFKVETPEKYMLELMVTDVGKGDATGFFSAPLTQIAQILEDEFHLHDHVNRISSIELAPPELGKTGKSSGRLNCTVLLSPKPEFENINQSQKRGRKSGSIQISPTRTGPWTTVRLNYATPAACWRLGNDVIASQVTVKDSSRYVTIRSLVSVQNNTDFILDVCLMSKHYKEGIHLLNETGNSDGSTTESNMVVIEEFYETEKYIPTAGWVSCLKLSQDFSEGIIPELTSRVELPSGWEWIDDWHLDKTSQTADDGWVYAPDVKSLKWPDSSDSKSVNHARQRRWVRNRRQIVNNIKKEVFIGQLKPGDTVPLPLSVLKHSGLYIFHFRPSTLNNCDEYSWSSVVDKPNKEDVNGPHIFSEICISTLSESEELLYCAQTSGTSSSSTHMLWFCLGIRALEIAKDIHSDPIQDWNLVIKAPLSIANYLPLVTEFSVLEKQKSGHFIDCCRAILHPGKTVKVYDADIRNPLFFSLFPQRGWLPVHEAVLISHPHGVPSRTLSLRSSITGRVVQVILEQNHNKEHPFLEKIIRFYAPYWFSISRCPPLTLHLVDRSGRKKSRKIYHRFKSNTNTDIFEEITEEEIHEGYTIASALNFNSLGLSVSINQSGTNKCVTVEDLSPLGDMDGSLDLYACDDDEGKRMQLFISTKPCPYQSVPTKVILVRPFMTFTNRLGHDIFIKLSDEDEPKVLHPHDSRVSFAFQKTGGHDKLQVRLEDTSWSLPLQIMKEDTIFLVLRRYDGIRRFLRMEIRGYEEGSRFIIVFRVGSADGPIRVENRTDNTISLRQSGFGEEAWIILPPLSTTNFCWEDPYNQHLIDTKISSDGSIGVWKLNTSTGLCSLEDGETQLCCYVAKEGDIKVIRFRDSQHFESDFHEEIGYLTAARNWRSQMQKPVQDSEAAPTELIVELGVVGISVIDHRPKELAYMYLERVFIAYSTGFDGGTTNRFEIIFGNLQFDNQLPLTLMPVLLAPEQTTDINHPAFRMTIEMQNENIVGIRVFPYICVQVTEKSWRLNIHEPLIWAVVELYNNLQLGRLPQSSSITQVDPEIRINLIDISEVKLKVVLEPAPAQRPHGVLGIWSPILSAVGNAFKIQVHLRRVMHKDRYMRESSILPAIGNRIWRDFIHNPLHLIFSLDVLGMASSTLASLSKGFAELSTDGQFLQLRSKQVWSRRITGVRDGIIQGTEALAQGVAFGVSGVVTKPVESARQNGLLGLAHGLGRAFLGFIVQPVSGALDFFSLTVDGIGASCSKCLEVFNKKVPFQRVRNPRAIHADSILREYCEREAIGQMVLHLAEGSTHFGCTEIFKEPSKFAFSDYYEEHFIVPYQRIVLVTNKRVMLLQCSDPGKLDKKPCKILWDVPWEELMALELAKVANSQPSHLIIHLRSFKRTENFARVIKCHIEEILGREPQAVRICSVVSKLFKEYQSDMKCLELKVPSSQRHVYFSCSEADGRDANILNKSIIRSRELLSSSFSNDEGRFVQHSMNFTKVWSSDLELRGRCILCKKQALEAGGICTIWRPICPDGYISIGDIAHLGSHPPNVAAIYRHVEGMFVPPVGYDLVWRNCQDDYITPVSIWHPRAPEGFVAPGCVAVADFAEPEPNLVYCVAESLAEETVFEEQKIWSAPDAYPWACHIYQIQSHALHFVALRQSKEESDWKPMRVIDKPPSPSPTSGNH* 4353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 40505043 40575692 + CsaV3_3G049680.1 Csa03g04662 525567

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04662 4352 Gene3D - 786 917 IPR011993 -
Csa03g04662 4352 ProSiteProfiles PH domain profile. 799 911 IPR001849 -
Csa03g04662 4352 Pfam SHR-binding domain of vacuolar-sorting associated protein 13 3321 3490 IPR009543 -
Csa03g04662 4352 MobiDBLite consensus disorder prediction 4333 4352 - -
Csa03g04662 4352 Pfam N-terminal region of Chorein or VPS13 2 102 IPR026854 -
Csa03g04662 4352 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 66 3232 - -
Csa03g04662 4352 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 3332 4326 - -
Csa03g04662 4352 SUPERFAMILY PH domain-like 798 915 - -
Csa03g04662 4352 SMART PH_update 800 913 IPR001849 -
Csa03g04662 4352 Pfam Vacuolar protein sorting-associated protein 62 2211 2380 IPR009291 -
Csa03g04662 4352 Pfam Vacuolar protein sorting-associated protein 62 1989 2152 IPR009291 -
Csa03g04662 4352 Pfam PH domain 802 910 IPR001849 -
Csa03g04662 4352 MobiDBLite consensus disorder prediction 922 942 - -
Csa03g04662 4352 Pfam Vacuolar sorting-associated protein 13, N-terminal 133 374 IPR031646 -
Csa03g04662 4352 Pfam Repeating coiled region of VPS13 559 782 IPR031642 -
Csa03g04662 4352 MobiDBLite consensus disorder prediction 2187 2211 - -
Csa03g04662 4352 PANTHER - 3332 4326 - -
Csa03g04662 4352 PANTHER - 66 3232 - -
Csa03g04662 4352 MobiDBLite consensus disorder prediction 2193 2211 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04662 K19525 VPS13A_C; vacuolar protein sorting-associated protein 13A/C - csv:101212417 8611.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g03319 Csa-Chr1:29684460 Csa03g04662 Csa-Chr3:40505043 9.93E-09 dispersed
Csa03g01540 Csa-Chr3:11457085 Csa03g04662 Csa-Chr3:40505043 5.71E-07 dispersed
Csa03g04662 Csa-Chr3:40505043 Csa01g03317 Csa-Chr1:29588551 4.12E-07 dispersed
Csa06g00736 Csa-Chr6:6010868 Csa03g04662 Csa-Chr3:40505043 5.94E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g579 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy04g00040 . Blo03g00821 . Bda07g00127 . . Bpe11g00358 . . . . Cmo19g00390 . . . . . . . . . . . . . Cla09g01192 Cam09g1259 Cec09g1274 Cco09g1310 . . Cre09g1223 . Csa03g04662 . Cme04g00049
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006969 1 2 4 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 2 37