Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g04686 ATGGCGTTGGCGGTGAAGGCTTTTCCGTTAACAGTGGTGAGTCACGTGGTGGGAATCGTGGCGATGATAATGGTATTGGTTTGGACCATTCATTTCAGAGGCGGTCTTGCTTGGGAAGCTGTTAATAAGAACCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATAATGAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATCCATTTGGTATTACACGGAGTCGCATTGGGACTTGGTATTGTAGGGATAATCGCAGCATTCAAAAACCATAATGAAAGTGGAATTGCTAATCTATACAGCTTGCATTCTTGGATTGGAATTGGGGTTATTAGCCTTTATGGTCTTCAGTGGGTGTATGGGTTTGCTACATTCTTCTACCCGGGTGGGTCTGGGGATCTCCGAAGAGTATCACTCCCTTGGCACGTCGTATTTGGGCTCGCTGTTTACGTATTGGCCGTTGGCAACTCGGCCTTAGGTTTCCTTGAGAAGCTCACGTTTCTGGAGAGCGGCGGCATCCCCAAGTACGGGACGGAGGCGTTTCTTGTCAATTTCACTGCCATCACCACTATCATTTTTGCTGTGTTTGTCATATTGTCTGTTATTTCTCAGCCTTGCGCTCAACAAGAAGACGACCATGGCGCTTATTCTGCTATATGA 702 45.44 MALAVKAFPLTVVSHVVGIVAMIMVLVWTIHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIMSYKSLPLRKEVKKVIHLVLHGVALGLGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFATFFYPGGSGDLRRVSLPWHVVFGLAVYVLAVGNSALGFLEKLTFLESGGIPKYGTEAFLVNFTAITTIIFAVFVILSVISQPCAQQEDDHGAYSAI* 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 40719163 40723194 + CsaV3_3G049920.1 Csa03g04686 525591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g04686 233 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Csa03g04686 233 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 1 233 - -
Csa03g04686 233 CDD Cyt_b561_ACYB-1_like 42 183 - -
Csa03g04686 233 SMART 561_7 49 175 IPR006593 -
Csa03g04686 233 PANTHER CYTOCHROME B561-RELATED 1 233 IPR043205 GO:0016491
Csa03g04686 233 Gene3D - 2 226 - -
Csa03g04686 233 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g04686 Csa-Chr3:40719163 Csa05g01961 Csa-Chr5:22992737 2.03E-60 dispersed
Csa03g04686 Csa-Chr3:40719163 Csa05g03088 Csa-Chr5:30889864 2.59E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g04686 K08360 - csv:101209308 430.639