Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00084 ATGGCATCATTTGCTATAGAAAATGTAGAAAGTGGACAAGCAATTTCTAGCATTTCTGGGACTGGAAAATGTGAAAGCTACTTCATTTTTAGTATTGAAACCTCCCTTGGGGATGCACTTCGGATATTTCTATATTTTATGGGCCTTGCATATTGTTTCGTTGGATTGTCTGCTATTACTGCTCGATTTTTTCGGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTAGAGATAGATCCACACACCAATACTGAAATTATTAGATATGAGAAGGTCTGGAATTTTACAATAGCAGATATCAGCTTACTGGCGTTTGGCACTAGCTTTCCTCAAATATCACTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTCTGGGACCTGGAACACTGGTTGGTTCTGCTGCTTTCGACCTTTTTCCCATTCATGCTGTTTGCGTTGTAGTGCCTAAGGCAGGGGAGTTGAAAAAAATATCTGATATAGGAGTTTGGCTAGTTGAGCTCGTTTGGTCTTTCTGGGCTTATATTTGGCTATACATTATTTTGGAGGTGTGGACACCAAAAGTAATAACTCTTTGGGAAGCTTTGTTGACTGTGCTACAGTATGGATTACTGCTTACACATGCTTATGCTCAAGATAAGAGATGGCCCTACTTGTCCCTTCCTTTGGCAAGAACCGAGAGGCCAGAGGAATGGGTGCCACCTGAGATTGATATATGCAAACAGGATAATCCCTGTAGAGAGGAATTTCAAGCCCATGAGAATGAGCAGAGAAGCATTGTTGACATTTTCTCCATCCATGATAGTGATGGGAAAGTATATCATGAAGTTCCTGGACACGATATTGCTGAATCCTCCAATAGTAATATTCCCGAGGAGATGGATGGAAAGGCAGACCACCCTCATGTGCTTAAAATTTGGAAACAACAGTTTGTGGATGCACTTTCGTTGGAAACTTCAGAATCAAAGCAGCGGAATAACATCTATTTACGATCAGCAAGATTATGCTGGCAGTTGATTGTTGCTCCATGGAGACTTTTGTTTGCTTTTGTACCTCCTTATCACATTGCTCATGGATGGGTTGCCTTTATTTGCTCCCTTATGTTCATAAGTGGGATAGCTTATGTCCTTACTAAGTTCACAGATCTAATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCAAGTGGAACTTCTTGGCCAGATTTAGTGGCTAGTAAGATTGCTGCTGAGCGCCAGACAACGGCAGACTCTGCCATTGCAAACATAACTTGCAGCAATTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGCTGATAAGCACTACATACAACTTCATAGCATATAAAGAACCATTAAAGATAAAGGATGCAGGAGGGCTGAGCTTCAGTTTGTTGGTGTTTTTTTCGACATCTGTGGCTTGCATTGTTGTGCTTGTGTTTAGACGTGTAACATTAGGTGCAGAACTTGGAGGGCCAAAGGTTTGGGCTTGGATTACATGTATCTTTTTCATGGTGCTTTGGGTCATCTTTGTGGTCTTGTCTTCACTCAAGGTTTCAGATATTATCTGA 1614 41.33 MASFAIENVESGQAISSISGTGKCESYFIFSIETSLGDALRIFLYFMGLAYCFVGLSAITARFFRSMENVVKHSRKVVEIDPHTNTEIIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELVWSFWAYIWLYIILEVWTPKVITLWEALLTVLQYGLLLTHAYAQDKRWPYLSLPLARTERPEEWVPPEIDICKQDNPCREEFQAHENEQRSIVDIFSIHDSDGKVYHEVPGHDIAESSNSNIPEEMDGKADHPHVLKIWKQQFVDALSLETSESKQRNNIYLRSARLCWQLIVAPWRLLFAFVPPYHIAHGWVAFICSLMFISGIAYVLTKFTDLISCVSGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLISTTYNFIAYKEPLKIKDAGGLSFSLLVFFSTSVACIVVLVFRRVTLGAELGGPKVWAWITCIFFMVLWVIFVVLSSLKVSDII* 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 481623 487146 + CsaV3_4G000840.1 Csa04g00084 525694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00084 537 Gene3D - 98 234 IPR044880 -
Csa04g00084 537 Gene3D - 322 531 IPR044880 -
Csa04g00084 537 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 301 537 - -
Csa04g00084 537 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 11 223 - -
Csa04g00084 537 Pfam Sodium/calcium exchanger protein 45 217 IPR004837 GO:0016021|GO:0055085
Csa04g00084 537 Pfam Sodium/calcium exchanger protein 365 529 IPR004837 GO:0016021|GO:0055085
Csa04g00084 537 PANTHER SODIUM/CALCIUM EXCHANGER 301 537 - -
Csa04g00084 537 PANTHER SODIUM/CALCIUM EXCHANGER 11 223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00084 K03452 - csv:101205540 1072.38