Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00384 ATGAGATTTTCACTTTCTCCCATTTTCAAATCCCCCGCCATTACCATACCTCCCAAATTCTCCTTCTCCTTCTCCTTCTCCGTCGCAGCCGCCATGTCCTCTTCCGATCACTCTCCCCCTGCCTTCGACCGTCCTCGCTCCGTCATCAAAAAGATTCTCGCTAAACTCCAACACGAAGGTGACGGCGCCGTCGTTCGTCGCGGCATCGGAAGGAATGATTTGAAGAATCTAGATCCGTTTCTTATGCTCGATGATTTCTCCGTCAGTCCGCCTGCTGGATTTCCCGATCATCCTCACCGAGGTTTTGAGACTGTGACATATATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCAGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAACTTTGGATCAATCTAGCATCCCATGACAAAATGATGGAGCCAAGGTATCAGGAGATCTCAAGCGACAACATTCCAAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTGATAGCAGGAGAATCCATGGGAGTCCATTCTCCAATCTACACAAGAACTCCAACTATGTACCTTGACTTCAGTTTGAGACCAAGAGCTCAAGTGCATCAAAGCATCCCAGACACATGGACATCTTTCGTGTACATAATAGAGGGGGAAGGTGTGTTCGGGTCATCGAACTCGTCGCGGGTAGCAGCACACCATGTTCTAGTATTGGGAGGTGGAGATGGGCTAAGTGTGTGGAACAGATCTTCAAAGCCATTGAGGTTTGTATTGGTTGCAGGGAAGCCATTGAACGAACCGATAGTTCAATATGGACCATTTGTTATGAACTCACAATCTGAAATCGACCAAGCAATTGAAGACTACCATTATGCTAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA 981 46.99 MRFSLSPIFKSPAITIPPKFSFSFSFSVAAAMSSSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISSDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFSLRPRAQVHQSIPDTWTSFVYIIEGEGVFGSSNSSRVAAHHVLVLGGGDGLSVWNRSSKPLRFVLVAGKPLNEPIVQYGPFVMNSQSEIDQAIEDYHYAKNGFEMAKYWRSQ* 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2357280 2359634 + CsaV3_4G003840.1 Csa04g00384 525994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00384 326 PANTHER PIRIN-LIKE PROTEIN 35 326 - -
Csa04g00384 326 PANTHER PIRIN-RELATED 35 326 IPR012093 -
Csa04g00384 326 CDD cupin_pirin_N 63 160 - -
Csa04g00384 326 Gene3D Jelly Rolls 59 311 IPR014710 -
Csa04g00384 326 SUPERFAMILY RmlC-like cupins 46 324 IPR011051 -
Csa04g00384 326 Pfam Pirin C-terminal cupin domain 211 315 IPR008778 -
Csa04g00384 326 Gene3D Jelly Rolls 180 285 IPR014710 -
Csa04g00384 326 CDD cupin_pirin_C 208 284 - -
Csa04g00384 326 PIRSF Pirin 44 324 IPR012093 -
Csa04g00384 326 Pfam Pirin 66 158 IPR003829 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00384 Csa-Chr4:2357280 Csa07g00984 Csa-Chr7:8713044 7.60E-146 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00384 K06911 - csv:101205861 643.654