Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00426 ATGCCTGGCATACCTCTCGTGGCTCGTGAAACTTCCTGTTCCAGAAACGCAGATCAGATGTGCCGTGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTTACTTTACTGCAAGCCAGTTGAACTCTATAACATTCTTCAGCGCCGTGCTATTAGAAATCCACTCTTTCTTCAAAGATGTTTGAGGTACAAAATAGAGACAAAACACAAGAGAAGGATCCAGATGACTATTTCAATCTCTAGGACTTCAAGTGTAGGTGGCCAGACACAAAATCTGTTTCCTATGTATGTCATCTTGGGAAGATTAGTCTCTGATATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTCAATCGAGCTTGCCTCTTAACTGGCATTAACAGAGTGGAATGCAGTTCTCAAGTTATAGCTAATTTCATCCTTCCTGAAATTAACAAGCTAGCTGTGGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTCAGCTGTGTTGGATCTGCAAATACTTTGTCTGGAGTAGATTCAGTTGATGGGCCTTTATACATGAGATCTGTTCCTGCGGTTGCAGGTTACTGCTTATGGGGCAAGATACCTCTGGAGTCACTTTACATTTCATGGCAGAATTCATCAAATTTTGGTCTTGGACAGAGGGCTGAGATTATGTCAAGCGTTGACATGCGCTCTTGTGTTGTGAAGACAAGTTGCGTCGATGGAGAGAAGTGTGTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCACATCAAGTACAGGTAACAATATCTGCAGAAGAGCTTGGTTCTAGGGATAAATCTCCATATGATTCATACACGTACAACGAAAAACCTTCCTCATCACTGTCTAATGTGATTCGGTTGAGGGCAGGAAATGTTATTTTTAATTATAGATACTACAACAACAGATTGCAGAAAACTGAAGTAACTGAAGACTTTTCCTGTCCATTTTGCTTGATCAAATGTGCAAGCTTTAAGGGCTTGAGATGCCACTTGTTATCATTACACGATCTCTTCAACTTTGAATTTTGGGTAACCGAAGAGTACCAAGCTGTAAACGTTTCCATGAAGACTGATGTTTGGAGGTCTGAGATCATCGCAGATGGCATTGATCCAAAGCAGCAAACATTCTTCTTCTGCTCAAGGCCTCTCAGACGTAAAAAGGCTAAGAGCGCAGTTCAAAGTGCAAAGCACATACATCCTTTTGTTGTAGAGTCTGAATATTCGGACAAGGCGGATGATGCTCAATCTAGCAAAGGGCACAATGTCGCACCAACTATGCTTCAATTTGCCAAGACGAGAAAATTATCGATTGAACGTGCAGACCCGAGACACTGTACCCTCCTAAGGAAGAGACAGTTCTTTCATTCTCACAGAGCTCAGCCAATGGCATTGGAACAAGTGTTATCTGATCGAGATAGCGAAGATGAAGTTGATGATGATGTTGCAGATCTAGAAGATAGGCGGATGCTCGATGATTTTGTTGACGTAACTAGGGATGAGAAGCGAATGATGCATATGTGGAATTCATTTGTCAGGAAGCAAAGGGTGCTGGCAGATGGCCATATCCCTTGGGCTTGCGAGGCATTTTCACAATTACACGGACCAAACCTTGTCAAAACTCCAGCTCTACTATGGTGTTGGAGATTGTTTATGATCAAGTTGTGGAACCATGGTCTACTTGATGCAAACTCCATGAACAGTTGTAACATTATTCTTGAAACAATACATAGTGAAGCTGCGGATCCTAAAAGCTGA 1803 41.82 MPGIPLVARETSCSRNADQMCRVESRVHLSEEEEIAAEESLLLYCKPVELYNILQRRAIRNPLFLQRCLRYKIETKHKRRIQMTISISRTSSVGGQTQNLFPMYVILGRLVSDIAVAEFSGVYRFNRACLLTGINRVECSSQVIANFILPEINKLAVEAKSGSLAILFVSCVGSANTLSGVDSVDGPLYMRSVPAVAGYCLWGKIPLESLYISWQNSSNFGLGQRAEIMSSVDMRSCVVKTSCVDGEKCVGFQIPYNSDSMHTAHQVQVTISAEELGSRDKSPYDSYTYNEKPSSSLSNVIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLIKCASFKGLRCHLLSLHDLFNFEFWVTEEYQAVNVSMKTDVWRSEIIADGIDPKQQTFFFCSRPLRRKKAKSAVQSAKHIHPFVVESEYSDKADDAQSSKGHNVAPTMLQFAKTRKLSIERADPRHCTLLRKRQFFHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTRDEKRMMHMWNSFVRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILETIHSEAADPKS* 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2655729 2683016 - CsaV3_4G004260.1 Csa04g00426 526036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00426 600 Pfam VEFS-Box of polycomb protein 451 586 IPR019135 -
Csa04g00426 600 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 20 599 - -
Csa04g00426 600 PANTHER POLYCOMB GROUP PROTEIN 20 599 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00242 Csa-Chr3:1938453 Csa04g00426 Csa-Chr4:2655729 5.19E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00426 - - csv:101213607 1145.18