Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00507 ATGGCGTATATGTGCGCAGACAGTGGTAATCTAATGGCTATTGCTCAACAACTCATCAACCAAAAACAACAGCAAGACCAACAGCAACACCATCTTTCTCCACTTTCCCCTTTTTCTATTCTTCCTTGGACTAATAACATCAACCCTTCCTCAACTATGGCTTCTTCTTCTTCTTCTCCTAATTTCTCTTTTGGGATTTCTTCCTCTTCCTTCTCTGACCCTTTTCATGTCGCCGCACCCCCTGATTCCTCCGACCCTTCTTTTCATTTTCCTAATTTGGACCACCCTTCTGCCGGATTTCGATTCTTCCCTAATTTTAGTGGTGCTGGTGGAGAGTTTGAATCTGATGAGTGGATGGATAGTTTAGTCGGCGGTGGAGATTCCACGGATAGCTCCACTTTGCCGTCTGGTTGTGAAGGTTATGGTGAGTTTGGTCTTTATGGTGCAGATCCATTTAATGGCTCTCCGCCGTCAGCTGTTGTTCTGGAAAGTTCGTACAAGATTAATAGTGTTCCGCCTCCGTGGCCGTCGTGTCCTCCATTGGTGAAGGAGGAGAGAGTAACGAATCCACCGGCGGAGAGTCCGTTGAAGAATGATGTTGTTGAAGGCTCATCGAGTGCATTAGAAGTCGAGTCATCGTCGCCGGTTCTGAAAGTGTTGCTTGATTGTGCGCGGCTTTGTGATTCTGAGCCTAACCGTGCAGCGAAAACTCTTAATCGGATTAGTAAATCTTTACGAGAAGATGGAGATCCGATTGAGCGAGTGGGGTTTTACTTTGGTGATGCTCTTCGGAAGAGATTGTCCTCGACGCCGATGAAGAATTGCTTGGATTCAACTGAGAGCGATGCTAATTCTGAAGATTTCTTGCTCTCTTACAAAGCTCTGAACGATGCCTGTCCTTACTCTAAGTTCGCGCATCTAACGGCCAACCAAGCAATTCTGGAAGTTACAGAGAGAGCCAGTAAAATTCACATTGTCGATTTCGGAATTGTTCAAGGCGTTCAATGGGCGGCGCTTCTGCAGGCTTTGGCAACGCGCGCCACCGGAAAACCTGTCAGGGTTCGTATCTCCGGAATACCAGCGCCGTCGCTCGGAGACTCACCGGCAGCGTCTCTATACGCCACTGGTAATAGACTCTCCGAGTTCGCAAAGCTTCTGGAATTGAATTTCGAGTTCCAACCGATTCTAACGCCGATTGAAAACCTGAAGGAATCGAGCTTCAGCGTTCAATCAGACGAGGTATTGGCCGTGAATTTCATGCTTCAATTGTACAATCTCCTGGATGAGAATCCAACCGGAGTTCATAATGCTCTCCGATTAGCAAAATCGTTGAGTCCTCATATAGTGACTCTCGGTGAGTATGAAGCGAGTTTGAACCGGAACGGATTCTACAATCGTTTCAAGAACGCTCTCAAATTCTACTCCGCCATTTTCGAATCGCTAGAGCCGAACTTGCCTCGAAACTCACCAGAAAGACTTCAGTTAGAAAGACTGTTACTCGGCCGTCGAATCGCCGGCGTGGTTGGAACCGTAGAAGATTCAAGACGCGAAAGAAGAGTACGCATGGAAGATAAAGAACAATGGAAGAATTTGATGGAAAACACCGGATTCGAACCTGTAGCACTCAGCCATTACGCCATTAGTCAGGCGAAAATACTTCTATGGAACTACAATTACAGTTCTCTCTACACACTGATCGAATCGGCGCCGGAATTTCTTTCTCTGGCATGGAACGACGTTCCTCTCTTAACTGTATCTTCCTGGCGTTGA 1770 46.89 MAYMCADSGNLMAIAQQLINQKQQQDQQQHHLSPLSPFSILPWTNNINPSSTMASSSSSPNFSFGISSSSFSDPFHVAAPPDSSDPSFHFPNLDHPSAGFRFFPNFSGAGGEFESDEWMDSLVGGGDSTDSSTLPSGCEGYGEFGLYGADPFNGSPPSAVVLESSYKINSVPPPWPSCPPLVKEERVTNPPAESPLKNDVVEGSSSALEVESSSPVLKVLLDCARLCDSEPNRAAKTLNRISKSLREDGDPIERVGFYFGDALRKRLSSTPMKNCLDSTESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEVTERASKIHIVDFGIVQGVQWAALLQALATRATGKPVRVRISGIPAPSLGDSPAASLYATGNRLSEFAKLLELNFEFQPILTPIENLKESSFSVQSDEVLAVNFMLQLYNLLDENPTGVHNALRLAKSLSPHIVTLGEYEASLNRNGFYNRFKNALKFYSAIFESLEPNLPRNSPERLQLERLLLGRRIAGVVGTVEDSRRERRVRMEDKEQWKNLMENTGFEPVALSHYAISQAKILLWNYNYSSLYTLIESAPEFLSLAWNDVPLLTVSSWR* 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3311850 3314552 - CsaV3_4G005070.1 Csa04g00507 526117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00507 589 ProSiteProfiles GRAS family profile. 207 589 IPR005202 -
Csa04g00507 589 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 217 588 - -
Csa04g00507 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 217 588 IPR005202 -
Csa04g00507 589 Pfam GRAS domain family 218 589 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00507 Csa-Chr4:3311850 Csa06g03233 Csa-Chr6:27323359 0 dispersed
Csa04g00507 Csa-Chr4:3311850 Csa06g00941 Csa-Chr6:7561913 1.61E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
31492 PF03514 GRAS 1.30E-108 CL0063 Csa TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00507 - - csv:101211368 1066.22