Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa04g00590 | ATGGGGATCAACATCCAATTAGGTCATTTGATTGTTGGTTTTATCATATTTGATTGTTTGTTTAAACCCATATTGGCAGAAGCTGATGACCAAAACCCAAAGGTACACATAGTTTACTTGGGAGAAAAGCCACATCATGATACTAAATTCACTATCGATTCTCACCATCAATTATTATCTACTATATTGGGAAGCAAGGAGAAATCAATGGAAGCAATGGTGTACAGTTATAAACATGGCTTTTCTGGATTTGCAGCCAAGCTCACTAAATCTCAAGCTCAAAAGCTATCTGAAATGTCGAGGGTGGTTCGAGTTGTCCCGAGTTCGCTTTACAAAGTGCATACTACAAGAAGTTGGGATTTTCTGGGGCTGTCTTCTTCTCCATTTGAGTCCTCAAACCTTCTTCATCGTGCTCAAATGGGTGAAAATGTCATTATAGGTGTTATTGATACAGGAATCTGGCCGGAGTCGGAGTCGTTCAAAGACAAAGGAGTAGGGTCTATACCATCACGTTGGAAAGGAACATGCGAATCAGGAGAACAATTCAACTCCACAAACTGCAACAAAAAAATCATAGGAGCGCGTTGGTTCATGAAGGGGTTCGTTGCAGACTTAGGTCGAGATGCGCTAGCCAAGGAATACTTATCACCACGAGACCTAAATGGACATGGAACTCACACAGCCAGCATAGCAGCAGGCTCATTTGTAGCAAACATCAATTACCACAACAACGCTGCCGGCACAGTGAGAGGTGGTGCACCACTCGCACGGTTAGCCATATACAAAGCACTATGGACGAAGGACGCCGTAGGGTCGACGGCGGACATATTGAAAGCGATAGATGAGGCTATAAATGATGGTGTGGATGTGTTGTCTATGTCGATTGGAAGCTTAACTCCTTTCCTTCCAGAGTTCAATGAAGCAAATGATATTGCATTTGGGTCATTTCATGCTATTGCAAAGGGGATTTCTGTTGTATGTGCGGCTGGAAATAGTGGGCCTACTCCACAAACGGTGGAGAATGTTGCACCTTGGATTTTCACTGTGGCTGCCAATACTATAGACAGAGCCTTTCTTGCATCCATTACAACACTACCAGATAACACCACTTTCTTGGGCCAAAGCTTATTGGATTCGAAAAAGGACCTTGTTGCCGAGTTGGAGACTCTGGATACGGGAAGATGTGATGATCTTTTGGGAAATGAAACTTTCATAAATGGAAAGGTGGTTATGTGTTTTTCAAATTTAGCTGATCATAACACTATATACGATGCGGCGATGGCGGTGGCCCGAGCAAATGGAACAGGAATTATTGTCGCCGGCCAACAAGATGATGATTTGTTTTCTTGTATACCCTCTCCAATTCCATGTATCCTAGTTGATACCGACGTTGGCTCAAAATTATTCTTCATCAACCTCTTGCAAAATAGTACTAATCCAGTGGTAAGGTTGAGGGCCACAAGAACTATCATCGGTAAGCCCATAACACCAGCTATTTCCTATTTCTCATCAAGAGGTCCAAATTCGGTTTCCAATCCTATTCTTAAGCCTGACATATCGGCTCCTGGATCTAACATTCTAGCTGCCGTTTCACCCCACCACATTTTCAACGAGAAAGGGTTTATGCTCTTGTCAGGAACTTCTATGGCCACACCTCATATTTCAGCTATCGTCGCTCTTCTTAAATCTGTGCACCCTACGTGGTCACCCGCCGCCATTAAATCAGCTCTCATGACAACCGCACGGACAGAGGTCTCTCCAGGACTACCTATTTTCGCAGAAGGAACTCCTCCAAAAATGGCAGACCCATTTGACTACGGCGGTGGAATCGTGGACGCAAACGCCGCAGTCGACCCAGGTCTTGTCTATGATATGGGTAGAAAAGATTACATAGATTATTACCTTTGTGGCATGGGGTATAAGGACGAGGATATTTCTCATCTAACACAGAGGAAAACAGTGTGTCCATTGCAAAGGTTGTCTGTGTTGGATTTGAATTTGCCGGCCATTACAATTCCTTCACTTGTAAACTCCACCATTGTGACTCGGACAGTGACTAATGTTGGGAACTTGAGCTGTGTTTATAAGGCAGAGATTGAGTCTCCTTTTGGTTGCAAGGTTAGTGTGAACCCTCAAGTGTTGGTGTTTAACTCTCAAGTGAAGAAGATTTCATTTAAGGTTATGTTTTTCACTCAAGTTCAAAGGAACTATGGCTACTCTTTTGGTAGGTTAACATGGACTGATGGTATTCATGTTGTTAAAATTCCTTTGTCTGTGAGATTTGGTTTCTTTTGA | 2295 | 43.09 | MGINIQLGHLIVGFIIFDCLFKPILAEADDQNPKVHIVYLGEKPHHDTKFTIDSHHQLLSTILGSKEKSMEAMVYSYKHGFSGFAAKLTKSQAQKLSEMSRVVRVVPSSLYKVHTTRSWDFLGLSSSPFESSNLLHRAQMGENVIIGVIDTGIWPESESFKDKGVGSIPSRWKGTCESGEQFNSTNCNKKIIGARWFMKGFVADLGRDALAKEYLSPRDLNGHGTHTASIAAGSFVANINYHNNAAGTVRGGAPLARLAIYKALWTKDAVGSTADILKAIDEAINDGVDVLSMSIGSLTPFLPEFNEANDIAFGSFHAIAKGISVVCAAGNSGPTPQTVENVAPWIFTVAANTIDRAFLASITTLPDNTTFLGQSLLDSKKDLVAELETLDTGRCDDLLGNETFINGKVVMCFSNLADHNTIYDAAMAVARANGTGIIVAGQQDDDLFSCIPSPIPCILVDTDVGSKLFFINLLQNSTNPVVRLRATRTIIGKPITPAISYFSSRGPNSVSNPILKPDISAPGSNILAAVSPHHIFNEKGFMLLSGTSMATPHISAIVALLKSVHPTWSPAAIKSALMTTARTEVSPGLPIFAEGTPPKMADPFDYGGGIVDANAAVDPGLVYDMGRKDYIDYYLCGMGYKDEDISHLTQRKTVCPLQRLSVLDLNLPAITIPSLVNSTIVTRTVTNVGNLSCVYKAEIESPFGCKVSVNPQVLVFNSQVKKISFKVMFFTQVQRNYGYSFGRLTWTDGIHVVKIPLSVRFGFF* | 765 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3888813 | 3895061 | + | CsaV3_4G005900.1 | Csa04g00590 | 526200 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa04g00590 | 764 | CDD | PA_subtilisin_like | 364 | 484 | - | - | |
Csa04g00590 | 764 | Pfam | Subtilase family | 141 | 586 | IPR000209 | GO:0006508|GO:0008236 | |
Csa04g00590 | 764 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 546 | 556 | IPR023828 | - | |
Csa04g00590 | 764 | Gene3D | - | 355 | 491 | - | - | |
Csa04g00590 | 764 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 114 | IPR037045 | - | |
Csa04g00590 | 764 | Gene3D | Peptidase S8/S53 domain | 143 | 630 | IPR036852 | GO:0004252|GO:0006508 | |
Csa04g00590 | 764 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED | 26 | 760 | - | - | |
Csa04g00590 | 764 | Pfam | Peptidase inhibitor I9 | 35 | 114 | IPR010259 | - | |
Csa04g00590 | 764 | PANTHER | PEPTIDASE S8 | 26 | 760 | - | - | |
Csa04g00590 | 764 | Gene3D | - | 635 | 761 | - | - | |
Csa04g00590 | 764 | SUPERFAMILY | Subtilisin-like | 135 | 621 | IPR036852 | GO:0004252|GO:0006508 | |
Csa04g00590 | 764 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 118 | 617 | - | - | |
Csa04g00590 | 764 | Pfam | Fibronectin type-III domain | 664 | 759 | IPR041469 | - | |
Csa04g00590 | 764 | PRINTS | Subtilisin serine protease family (S8) signature | 141 | 160 | IPR015500 | - | |
Csa04g00590 | 764 | PRINTS | Subtilisin serine protease family (S8) signature | 219 | 232 | IPR015500 | - | |
Csa04g00590 | 764 | PRINTS | Subtilisin serine protease family (S8) signature | 545 | 561 | IPR015500 | - | |
Csa04g00590 | 764 | CDD | Peptidases_S8_3 | 111 | 581 | IPR034197 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g01453 | Csa-Chr1:10166376 | Csa04g00590 | Csa-Chr4:3888813 | 2.91E-167 | dispersed | |
Csa04g00590 | Csa-Chr4:3888813 | Csa06g03738 | Csa-Chr6:29827158 | 3.76E-166 | dispersed | |
Csa07g01352 | Csa-Chr7:13416139 | Csa04g00590 | Csa-Chr4:3888813 | 3.25E-13 | dispersed | |
Csa07g01353 | Csa-Chr7:13421447 | Csa04g00590 | Csa-Chr4:3888813 | 1.58E-13 | dispersed | |
Csa04g00590 | Csa-Chr4:3888813 | Csa07g02348 | Csa-Chr7:21727193 | 2.65E-147 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa04g00590 | - | - | csv:101219903 | 1531.54 |