Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00600 ATGGCGCTTAAGGTCTATGCAGATCGAATGTCACAGCCATCGCGCGCCGTCCTCATCTTCTGCAAGGTCAACGGGATTGCTTTTGAGGAGGTGAAGGTAACCTTGTCCAAATTTGAACACCTGACTCCTGAATTCAAAGAGATCAACCCAATGGGAAAGGTTCCCGTCATTGTTGATGGAAGATTTAAGCTGTTTGAGAGTCATGCTATTCTTATCTACATTTCTTGTGCGTTTCCTGGTGTGGCAGATCACTGGTATCCAGCTGATCTTTTCAGGAGGGCTAAAATACATTCAGTATTGGATTGGCATCATTCTAACTTACGTAGTGGTGCAGCTCCATTAATATTCAATACTGTTCTTGCACCTTTGTTCGGCCGTCCTCTGAATCCTCAAGCAGCTGCTGAAGCTGAGAAGCTGTTATCCAAGTCGCTTTCAAAAATTGAGTCATTTTGGCTGAAGGGGAATGGGAAATATTTGCTAGGTGGCCTCAAACCATCCATAGCTGATCTTAGTCTGGTTTGTGAAATTATGGAACTAGAGCTTTTGGACGAGAAGGATCGGAGTCGTATTCTAGGTCCACACCCGAAAGTGAGGGAGTGGATTGAGAATACTAGAAATGCTACAAACCCACATTTTGACGAGTTTCATAAGATTCTCTTCAAGCTCAAGGAAACTCTACAAAAGCAGCACTCCCTGAAACTGACTTCAAAAATTTGA 717 43.51 MALKVYADRMSQPSRAVLIFCKVNGIAFEEVKVTLSKFEHLTPEFKEINPMGKVPVIVDGRFKLFESHAILIYISCAFPGVADHWYPADLFRRAKIHSVLDWHHSNLRSGAAPLIFNTVLAPLFGRPLNPQAAAEAEKLLSKSLSKIESFWLKGNGKYLLGGLKPSIADLSLVCEIMELELLDEKDRSRILGPHPKVREWIENTRNATNPHFDEFHKILFKLKETLQKQHSLKLTSKI* 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3958161 3961178 + CsaV3_4G006000.1 Csa04g00600 526210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00600 238 Gene3D Glutaredoxin 1 82 - -
Csa04g00600 238 SFLD Main (cytGST) 1 230 - -
Csa04g00600 238 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 225 IPR010987 -
Csa04g00600 238 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 231 IPR043377 -
Csa04g00600 238 SUPERFAMILY GST C-terminal domain-like 83 217 IPR036282 -
Csa04g00600 238 Gene3D - 83 238 - -
Csa04g00600 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Csa04g00600 238 Pfam Glutathione S-transferase, C-terminal domain 135 206 IPR004046 -
Csa04g00600 238 SFLD Main.4: Theta-like 1 230 - -
Csa04g00600 238 CDD GST_N_Theta 3 78 IPR040075 -
Csa04g00600 238 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Csa04g00600 238 CDD GST_C_Theta 92 222 IPR040077 -
Csa04g00600 238 SUPERFAMILY Thioredoxin-like 2 87 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00600 Csa-Chr4:3958161 Csa07g01817 Csa-Chr7:18391662 7.62E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00600 K00799 - csv:101211608 455.292