Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00699 ATGGCCGGTCAGTCGCGTAAGTGGCTGGTTCTTGTGGCGACGATATGGATTCAAGCATTCACTGGCACCAACTTTGATTTCTCGGCCTACTCTTCCAAACTAAAATCGGTATTAGGCATTTCTCAAGTTCAACTTAATTATCTAGCCACAGCCTCCGATCTCGGCAAAGTCTTCGGCTGGTCCTCTGGATTAGCTCTGCTTCATCTCCCGTTGCCGATGGCTATGTTCATCGCCGCTTTTTTAGGATTCATCGGCTACGGCTTCCAATGGCTCCTAATCGTTGATTTCATCTCCTTGCCCTATTTCTTGGTGTTCTTCTTGTGCTTGCTTGCCGGTTGCAGCATTTGTTGGTTCAACACAGTTTGTTTCGTTCTTTGCATTCGAAACTTCTCAGCAAATCGCCCATTAGCATTATCTCTCACTGTTAGCTTCAATGGCGTCAGTGCCGCTTTCTACACTCTCGCCGGCAACGCCATTAATCCCTCTTCACCTCCCATTTACCTTCTCCTCAACGCTCTCATTCCCCTTCTCATCTCCATCGTCGTCTTCCTCCCCGTCCTCCACCAACCCCCTCTTCATTCTCTTTCCCTCCCCTCCGACGCCGTCCACCGAGACTCCCTCATTTTCCTCATCTTGAACTTCCTTGCCATCATCGTCGGAATCTACCTTCTCCTCTTCGGCTCTGTCACTTCCGCTGATCCCATGATCGCACGCCTACTCTTCATCGGAGCCATTGTTCTTCTTATCTTGCCTCTCTGTATTCCTGGTATTGTCTATGCTAATGATTGGTTCCATCGAACCGTTAATTCCAGCTTCCGTCTCGATGGATCTAACTTCATTCTCGTCCACGACGAAGATCTCGAGTTTCACAAAGAGTTGTTGCTTAGTCTTGAATCCAATGGAAGCTTCGGCAATGGCGAATCTCCGTTGTTGTCTGAATCTGCTTCGTTAATTGACGGTGAGACTGAACCATCGAAAGGCTGCTTGAGGAAATTGATTGAGATAGATCAATTAGCGATGCTTGGGGAAGAACATTCGTCGAGTCGATTGGTGAAACGCCTGGATTTTTGGCTGTATTTCATTGCTTACATTTGTGGAGGCACAATCGGACTCGTTTACAGCAACAACATAGGTCAGATTGCGCAATCCCTAGGTTTAAGTTCAAGAACCAAAGCGATTGTAACACTCTACTCCTCATTCTCTTTCTTCGGCCGATTGCTCTCCGCCGTACCAGACTACATTCGAGCGAAATTGTATTTTGCAAGAACAGGATGGCTTTCGATTGCTCTAATTCCAACTCCTATAGCATTCTTCCTGCTATCGGCATCATCCACCGCAATGGCAGTTTACATAGGCACGGCGCTGATCGGCTTAAGCTCCGGATTCATATTCGCAGCAGCAGTTTCCATTACCGCGGAGCTGTTTGGACCAAATAGCTTAGGCGTTAACCACAACATTCTGATCACAAACATCCCTATCGGATCTCTGCTATACGGCATGCTTGCGGCGGTGGTGTACGATTCACAGGGAAAAAGCTCGGACAACGGGGAGGCGATTGTATGCATGGGAAGAAGGTGCTATTTCTTAACATTTGTATTTTGTGGATGCATTTCTGTGGTGGGATTGGTTTCAAGTGTGTTGTTGTTCTTGAGAACAAGACATGCTTATGATCGCTTTGAAAGCAGTAGGATTTCTAGTAGTACAAATCGATTGTATTGA 1719 46.89 MAGQSRKWLVLVATIWIQAFTGTNFDFSAYSSKLKSVLGISQVQLNYLATASDLGKVFGWSSGLALLHLPLPMAMFIAAFLGFIGYGFQWLLIVDFISLPYFLVFFLCLLAGCSICWFNTVCFVLCIRNFSANRPLALSLTVSFNGVSAAFYTLAGNAINPSSPPIYLLLNALIPLLISIVVFLPVLHQPPLHSLSLPSDAVHRDSLIFLILNFLAIIVGIYLLLFGSVTSADPMIARLLFIGAIVLLILPLCIPGIVYANDWFHRTVNSSFRLDGSNFILVHDEDLEFHKELLLSLESNGSFGNGESPLLSESASLIDGETEPSKGCLRKLIEIDQLAMLGEEHSSSRLVKRLDFWLYFIAYICGGTIGLVYSNNIGQIAQSLGLSSRTKAIVTLYSSFSFFGRLLSAVPDYIRAKLYFARTGWLSIALIPTPIAFFLLSASSTAMAVYIGTALIGLSSGFIFAAAVSITAELFGPNSLGVNHNILITNIPIGSLLYGMLAAVVYDSQGKSSDNGEAIVCMGRRCYFLTFVFCGCISVVGLVSSVLLFLRTRHAYDRFESSRISSSTNRLY* 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4726385 4733869 - CsaV3_4G006990.1 Csa04g00699 526309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00699 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 567 - -
Csa04g00699 572 Pfam Nodulin-like 7 255 IPR010658 -
Csa04g00699 572 Gene3D MFS general substrate transporter like domains 348 560 IPR036259 -
Csa04g00699 572 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 567 - -
Csa04g00699 572 SUPERFAMILY MFS general substrate transporter 335 554 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02564 Csa-Chr1:22540657 Csa04g00699 Csa-Chr4:4726385 2.27E-90 dispersed
Csa04g00699 Csa-Chr4:4726385 Csa06g00642 Csa-Chr6:5355252 1.15E-155 dispersed
Csa04g00699 Csa-Chr4:4726385 Csa04g00701 Csa-Chr4:4741052 3.47E-28 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00699 - - csv:101211287 1076.23