Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00705 ATGGGGAGTGAAAAGTTTGGGCTATGGCTATTTTTTGTTGCTTCTGTACAGTTTTTCCTTAAAGCACAGTGTATTAATGTAGGAATTACTTATGTTCAAGATGCTGTTATCAAAGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGGTTTGGCTCTGGGATCAATAATTGGTTGATTCAACTCGAGGGAGGAGGCTGGTGCAACAATGTCACAACTTGCCTCCAACGCAGGGACACTCGTTTAGGATCGTCTAAGAAAATGGTAACCCAGCTTGCGTTCTCGGGAATTTTGAGCAATAAACCGCAATTCAATCCAGATTTCTATAACTGGAACAGAATCAAGGTTCGATACTGTGATGGATCTTCTTTTACTGGAGACGTTGAAGCCGTTGATTCTGCTACCAATCTCCATTTCAGGGGAGCAAGAGTTTTTCGTGCCATCATCGATAACCTACTCGCCAAGGGAATGAAGAATGCAAAAAACGCTATTCTCTCGGGTTGCTCAGCGGGTGGATTAAGTTCCATTTTGCATTGTGATAACTTTAAATCTCTACTTCCTCCTACTACTAAAGTGAAGTGCCTCTCAGATGCAGGATACTTCATCAACGCGAAAGACGTCTCTGGAGCACAACACATCGAAGGCTTCTACAGCGATGTAGTTACCACCCATGGTTCTGCCAAGAACTTGCCTATATCATGCACGTCAAAAATGAAACCTGAGATGTGTTTCTTTCCTCAAAATGTGGTTCAGCTCATTCAGACTCCAATATTTCTTGTAAACGCAGCTTATGACTCATGGCAGATAAAGAACATACTGGCACCTGGTGTTGCTGATCCACACGGTACTTGGCACGAATGCAAGCTCGACATCAAAAACTGCTCACCAATTCAGCTTCGTACTATGCAGGACTTCAGGGTTCAGTTTTTGAGTGCATTGAATGGGGTTGGAAGTTCTTTATCAAGAGGATTGTTCATAGATTCTTGCTATGCCCACTGCCAAACCGAAATGCAGGAGACGTGGTTACGAACGGACTCTCCCGTGCTGAGTAAGACGACCATTGCAAAGGCAGTTGGAGACTGGTTTTTCGATAGGGCTCCGTTCCAGAAGATCGATTGTCCTTACCCGTGCAACCCGACTTGCCACAACCGCATCTTCGAAGCAAAAGACCACCTCGAATAA 1197 44.61 MGSEKFGLWLFFVASVQFFLKAQCINVGITYVQDAVIKGAVCLDGSPPAYHFSDGFGSGINNWLIQLEGGGWCNNVTTCLQRRDTRLGSSKKMVTQLAFSGILSNKPQFNPDFYNWNRIKVRYCDGSSFTGDVEAVDSATNLHFRGARVFRAIIDNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPPTTKVKCLSDAGYFINAKDVSGAQHIEGFYSDVVTTHGSAKNLPISCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHECKLDIKNCSPIQLRTMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLRTDSPVLSKTTIAKAVGDWFFDRAPFQKIDCPYPCNPTCHNRIFEAKDHLE* 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4777839 4781791 + CsaV3_4G007050.1 Csa04g00705 526315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00705 398 Pfam Pectinacetylesterase 22 371 IPR004963 GO:0016787
Csa04g00705 398 PANTHER PECTIN ACETYLESTERASE 5 394 - -
Csa04g00705 398 PANTHER NOTUM-RELATED 5 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02705 Csa-Chr1:23992099 Csa04g00705 Csa-Chr4:4777839 1.51E-152 dispersed
Csa04g00705 Csa-Chr4:4777839 Csa04g01491 Csa-Chr4:14648224 2.79E-138 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00705 K19882 - csv:101214431 833.558