Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00706 ATGGATTGGGCATTCGTCCACAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTCAGCCATTGAAAGCTGCTCTGTTGATTAATTATGACCCAACTGGGCCTTCCCGCTTGCTTTCAACCATTGCAGAACAAGAAGGAATATTGCTTAATCCCATAGAACTGAATCAGTTTGTCGATTTCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATTGGCTTAAATCAATACATAATGACATCAGTTCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAAGGTGTTATTATAGTGCAGACAACGGCATTTATTTTGATTGCTATGTATGATGGTTCAATCGCAGCAGCATCTCGGGCGATGGCAGCAGCCGATCAGTTATCGTGGGTATTAGCCAGGAAAAATTTCTAG 444 43.24 MDWAFVHKAWDKWASGSIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFVDFIKRDKPQNESFSIGLNQYIMTSVHENWFCARCMNTIKHAGEGVIIVQTTAFILIAMYDGSIAAASRAMAAADQLSWVLARKNF* 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4782205 4786713 + CsaV3_4G007060.1 Csa04g00706 526316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00706 147 Pfam Profilin 43 146 IPR005455 GO:0003779
Csa04g00706 147 PANTHER OS05G0241400 PROTEIN 1 146 - -
Csa04g00706 147 Gene3D Dynein light chain 2a, cytoplasmic 9 147 - -
Csa04g00706 147 SUPERFAMILY Profilin (actin-binding protein) 10 142 IPR036140 -
Csa04g00706 147 PANTHER OS05G0241400 PROTEIN 1 146 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00706 - - csv:105435190 296.589