Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa04g00717 ATGGTGTTTGGGAAATTTAGGGATATCCTCTCGTCTGTAGCCACTCGGTTGTCGGGCCGCCATTCTTCTACAGATGCATTTAAATCTTCATCGTCGCCTCCTTTGATCGCTTCCCCATCTCCTCTTGTTGCCGGTTTTGTTAGTCCTGCTCTTAAGAACAATCTAAGGCTTTCGTCGTCTCTTCAGGACCTCTCTACTTACCGTAGACTTGATCTTGAAGAAGGTAATCGTGGCGTTGAGAATGCTTCTCCTGATTTTTCACCACTCCAGCGAGAAAATGCCAGCTCTAGTTTCTCAAAGGAGAAGACATTGCCTGGAAGCTCCTTCTGGTGGCTGACCAGGAAGTGGATGCGAACCGTTGTTCTTTTTCTATGTCTGTTGCTGTTTTGTTTTCTAATTTATACGGTTTCTATGTATATTTATTCATATTGGTCGCAAGGAACACCTAGATACTATGTGGTGCTTGACTGTGGAAGTACTGGAACTCGAGCTTTTGTTTATCAAGCAAATGTTAATTATAAGAAAAATGGAGCCCTTCCCATTGCTATCAGGTCATATACAGGACAAAAGAAGAAATTGAAGTCTCAAAGTGGACGGGCTTATGATCGAATGGAAACAGAACCTGGTCTCGATAAGTTGGTTCGTAATATGACTGGTTTGAAGAAAGCTATTAAACCTCTGCTTCAATGGGCTGAGAAGCAGATTCCAAAGCGTGCCCATGAAAGCACCTCGCTTTTCCTTTATGCGACTGCTGGAGTTAGAAAGTTACCACCTGCAGATTCAAAGTGGCTTCTGGACAGTGCCTGGTCTATATTAAAGAGTTCGCGTTTTCTTTGCCAGAGAGAGTGGGTTAAAACCATTTCAGGTACAGAAGAGGCTTACTATGGCTGGATAGCTCTTAACTATCAAAAAGAATTGTTGGGAGCTACACCAAGGGAACCAACATATGGGGCACTCGACTTGGGTGGTTCTTCTTTGCAAGTAACTTTCGAAAGTAAGGAACAAAATGAGTCTAGTTTGAACATTAAAATTGGAAATGTTGATTACCATCTTAATGCCTATTCTCTTACTGGCTATGGTCTAAATGATGCATTTGGGAAATCTGTTGTCCATCTATTAAGAAGGATCCAAGAACCTGAAAAGCTGGATCTGTCTAATGGGAAATTTAAACTAAACCACCCTTGCCTGCACTCTGGCTACAATGAGCAGTATACATGTAACCAGTGTGGGAAATTATTGGACGGAGGAAGTAAGTCTGGGATTTCTCTAAGGCTGATTGGTGCTCCAAACTGGGAAGAATGTTCTGCACTTGCTAAAGTTGCTGTAAATTTTTCTGAATGGTCAAATACAAGCACTGGAGTTGATTGTGATGTACAACCTTGTGCCATAACTAATAACTACCCTCCACCATATGGAAATTTTTACGCCATTTCTGGTTTCTTTGTGGTATTTCGATTCTTCAATCTGACTTCAGAGGCTACACTTGATGATGTATTAGAAAGGGGCCACAAATTTTGTGAGAAACCTTGGGATGATGCTCAGGCTAGTGTTCCTCCACAGCCCTTTATTGAGCAATACTGCTTTAGAGCACCATACATAGTCTCACTCCTTAGAGAGGGGTTGCATATTACTGATAAACAAATCACTATTGGTTCTGGGAGTACAACTTGGACACTTGGGGTTTCATTGTTGGAGGCTGGAAAGGCATTTACAGTTGCAACTAGGCTAGAGCTTCGTGGTTATGAAATTTTTAAAATGAAGATTGATCCTCTAATTCTAATGGTCGTTCTGTTCACATCATTGTTTTTCCTGCTTGCATTATCCTGTGTACGAAGTGCATTACCTAGATTTTTCCGGAGGCCATATCTCCCAATTTTCAGGCATAATGCTGTCTCCACCACATCTGTTCTAAACATTCCATCTCCTTTTCGGTTACAGCGGTGGAGTCCAATGAGTGCTGGTGATGGCAGAGTCAAGATGCCACTGAGTCCAACAGTTCAAGGTTCTCAAGAAAGACCCTTTGGCTTAGGGCATGGCTTTAGCAGTAGCAGTGGCATCCAACTTATGGAGTCGTCATTGCACCGGTCGACGAGTAGTGGGGTTTCGCATAGTTATTCTTCAAATAGCCTTGGCCAAATGCAATTTGACAATAGCAGTGTTGGTTCCTTCTGGACTCCGCGCCGAAGTCAGATGCGCCTTCAAAGTAGACGATCACAATCTCGAGAGGACCTATCTTCGACATTGTCCGAAACACACATGGTGAAGGTTTAG 2271 42.76 MVFGKFRDILSSVATRLSGRHSSTDAFKSSSSPPLIASPSPLVAGFVSPALKNNLRLSSSLQDLSTYRRLDLEEGNRGVENASPDFSPLQRENASSSFSKEKTLPGSSFWWLTRKWMRTVVLFLCLLLFCFLIYTVSMYIYSYWSQGTPRYYVVLDCGSTGTRAFVYQANVNYKKNGALPIAIRSYTGQKKKLKSQSGRAYDRMETEPGLDKLVRNMTGLKKAIKPLLQWAEKQIPKRAHESTSLFLYATAGVRKLPPADSKWLLDSAWSILKSSRFLCQREWVKTISGTEEAYYGWIALNYQKELLGATPREPTYGALDLGGSSLQVTFESKEQNESSLNIKIGNVDYHLNAYSLTGYGLNDAFGKSVVHLLRRIQEPEKLDLSNGKFKLNHPCLHSGYNEQYTCNQCGKLLDGGSKSGISLRLIGAPNWEECSALAKVAVNFSEWSNTSTGVDCDVQPCAITNNYPPPYGNFYAISGFFVVFRFFNLTSEATLDDVLERGHKFCEKPWDDAQASVPPQPFIEQYCFRAPYIVSLLREGLHITDKQITIGSGSTTWTLGVSLLEAGKAFTVATRLELRGYEIFKMKIDPLILMVVLFTSLFFLLALSCVRSALPRFFRRPYLPIFRHNAVSTTSVLNIPSPFRLQRWSPMSAGDGRVKMPLSPTVQGSQERPFGLGHGFSSSSGIQLMESSLHRSTSSGVSHSYSSNSLGQMQFDNSSVGSFWTPRRSQMRLQSRRSQSREDLSSTLSETHMVKV* 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4909727 4913811 + CsaV3_4G007170.1 Csa04g00717 526327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa04g00717 756 MobiDBLite consensus disorder prediction 726 756 - -
Csa04g00717 756 MobiDBLite consensus disorder prediction 740 756 - -
Csa04g00717 756 Gene3D - 142 289 - -
Csa04g00717 756 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 83 714 IPR000407 GO:0016787
Csa04g00717 756 Pfam GDA1/CD39 (nucleoside phosphatase) family 149 565 IPR000407 GO:0016787
Csa04g00717 756 Gene3D Exopolyphosphatase. Domain 2 290 552 - -
Csa04g00717 756 PANTHER APYRASE 7-RELATED 83 714 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00867 Csa-Chr1:5422614 Csa04g00717 Csa-Chr4:4909727 1.76E-88 dispersed
Csa04g00717 Csa-Chr4:4909727 Csa04g01139 Csa-Chr4:9703914 6.75E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa04g00717 - - csv:101219987 1455.27